Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29905 and AO356_29910 are separated by 293 nucleotidesAO356_29910 and AO356_29915 are separated by 280 nucleotidesAO356_29915 and AO356_29920 are separated by 579 nucleotidesAO356_29920 and AO356_29925 overlap by 4 nucleotides AO356_29905: AO356_29905 - hypothetical protein, at 6,955,136 to 6,955,807 _29905 AO356_29910: AO356_29910 - hypothetical protein, at 6,956,101 to 6,956,556 _29910 AO356_29915: AO356_29915 - hypothetical protein, at 6,956,837 to 6,957,559 _29915 AO356_29920: AO356_29920 - hypothetical protein, at 6,958,139 to 6,967,702 _29920 AO356_29925: AO356_29925 - hypothetical protein, at 6,967,699 to 6,985,512 _29925
Group Condition AO356_29905 AO356_29910 AO356_29915 AO356_29920 AO356_29925
carbon source L-Lysine (C) -0.2 -0.1 -0.6 -0.1 -0.1
stress Choline chloride 500 mM +0.1 -0.1 -0.5 -0.1 -0.1
survival 4C survival; 360 hrs -0.2 -0.5 +0.1 +0.1 -0.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 +0.2 +0.1 -0.4 -0.2
stress KB-half, Pseudo5 supernatant -0.2 -0.1 +0.2 -0.2 -0.1
carbon source Tween 20 (C) +0.2 -0.2 -0.3 +0.0 +0.0
stress Rifampicin 0.0024 mg/ml -0.0 -0.5 +0.4 -0.1 -0.0
carbon source Carbon source Sucrose 2.5 mM -0.1 +0.1 -0.5 +0.1 +0.1
carbon source D-Trehalose (C) +0.1 +0.2 -0.5 -0.0 +0.0
pH Minimal media pH7 +0.0 -0.5 +0.2 +0.0 +0.1
motility outer cut, LB soft agar motility assay -0.4 +0.3 -0.2 +0.1 +0.1
stress Lomefloxacin 0.0005 mM +0.3 -0.3 -0.2 +0.1 +0.1
temperature LB 30C +0.2 -0.4 +0.1 +0.0 +0.0
carbon source L-Aspartic Acid (C) +0.1 +0.2 -0.3 -0.1 -0.0
carbon source acetate (C) -0.2 -0.2 +0.3 +0.1 -0.0
nitrogen source Urea (N) +0.2 +0.1 -0.5 +0.1 +0.0
stress Sisomicin 0.001 mg/ml +0.1 -0.4 +0.4 +0.1 -0.2
motility outer cut, LB soft agar motility assay +0.2 +0.3 -0.5 +0.1 +0.0
carbon source Carbon source Sucrose 5 mM +0.1 -0.2 +0.2 +0.1 +0.1
nitrogen source Inosine (N) +0.1 +0.3 -0.2 +0.1 +0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 +0.1 +0.6 -0.3 +0.1
carbon source Carbon source Sucrose 5 mM +0.0 +0.4 -0.2 +0.1 +0.1
carbon source Carbon source D-Mannitol 2.5 mM -0.2 +0.5 -0.1 +0.0 +0.1
carbon source D-Xylose (C) +0.1 -0.2 +0.3 +0.1 +0.0
stress Nickel (II) chloride 0.625 mM +0.2 -0.0 +0.3 +0.2 -0.0
stress Thallium(I) acetate 0.008 mg/ml -0.1 +0.1 +0.4 +0.1 +0.1
carbon source Carbon source D-Glucose 10 mM +0.1 +0.3 +0.1 +0.1 +0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.3 +0.2 +0.4 -0.1 -0.1
carbon source Carbon source Sucrose 10 mM +0.1 +0.4 +0.3 +0.2 -0.0
anaerobic Nitrate reduction with yeast extract +0.3 +0.2 -0.1 +0.3 +0.3
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