Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 198 experiments or choose conditions or try the comparative fitness browser

500 ntAO356_29895 and AO356_29900 are separated by 188 nucleotidesAO356_29900 and AO356_29905 are separated by 268 nucleotidesAO356_29905 and AO356_29910 are separated by 293 nucleotidesAO356_29910 and AO356_29915 are separated by 280 nucleotides AO356_29895: AO356_29895 - AraC family transcriptional regulator, at 6,952,529 to 6,953,494 _29895 AO356_29900: AO356_29900 - L-fucose dehydrogenase, at 6,953,683 to 6,954,867 _29900 AO356_29905: AO356_29905 - hypothetical protein, at 6,955,136 to 6,955,807 _29905 AO356_29910: AO356_29910 - hypothetical protein, at 6,956,101 to 6,956,556 _29910 AO356_29915: AO356_29915 - hypothetical protein, at 6,956,837 to 6,957,559 _29915
Group Condition AO356_29895 AO356_29900 AO356_29905 AO356_29910 AO356_29915
carbon source L-Lysine (C) +0.3 -0.4 -0.2 -0.1 -0.6
survival 4C survival; 360 hrs -0.3 +0.1 -0.2 -0.5 +0.1
motility outer cut, LB soft agar motility assay -0.3 -0.4 +0.2 -0.1 +0.0
motility outer cut, LB soft agar motility assay -0.2 -0.1 -0.4 +0.3 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 -0.3 -0.3 +0.2 +0.1
stress KB-half, Pseudo5 supernatant -0.3 -0.0 -0.2 -0.1 +0.2
temperature LB 30C -0.2 -0.0 -0.1 -0.4 +0.2
pH Minimal media pH7 -0.2 +0.0 +0.0 -0.5 +0.2
stress Nalidixic 0.004 mg/ml -0.0 -0.3 -0.1 +0.2 -0.1
carbon source D-Trehalose (C) -0.0 -0.1 +0.1 +0.2 -0.5
anaerobic Nitrate reduction with yeast extract -0.2 -0.6 +0.3 +0.2 -0.1
motility outer cut, LB soft agar motility assay -0.3 -0.1 +0.2 +0.3 -0.5
carbon source D-Fructose (C) -0.3 -0.1 +0.1 -0.2 +0.2
carbon source Carbon source Sucrose 2.5 mM +0.1 +0.2 -0.1 +0.1 -0.5
carbon source Carbon source D-Glucose 10 mM -0.2 -0.2 +0.1 +0.3 -0.1
stress Sisomicin 0.001 mg/ml -0.2 -0.2 +0.1 -0.4 +0.4
carbon source L-Aspartic Acid (C) -0.1 -0.1 +0.1 +0.2 -0.3
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.1 -0.3 -0.1 +0.2 +0.2
stress Rifampicin 0.0024 mg/ml +0.2 +0.1 -0.0 -0.5 +0.4
carbon source Carbon source D-Mannitol 2.5 mM -0.2 +0.0 -0.2 +0.5 -0.1
nitrogen source Urea (N) +0.1 +0.1 +0.2 +0.1 -0.5
nitrogen source Inosine (N) +0.2 -0.2 +0.1 +0.3 -0.2
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.2 -0.1 +0.0 +0.5 -0.1
carbon source D-Xylose (C) +0.1 -0.2 +0.1 -0.2 +0.3
stress Lomefloxacin 0.0005 mM +0.5 +0.0 +0.3 -0.3 -0.2
stress copper (II) chloride 2.5 mM -0.3 +0.3 +0.2 +0.0 +0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.2 +0.0 -0.1 +0.1 +0.6
carbon source Carbon source D-Glucose 10 mM +0.2 +0.1 +0.1 +0.3 +0.1
carbon source Carbon source Sucrose 10 mM +0.0 +0.2 +0.1 +0.4 +0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 +0.1 +0.3 +0.2 +0.4
remove
AO356_29895
plot		 remove
AO356_29900
plot		 remove
AO356_29905		 remove
AO356_29910
plot		 remove
AO356_29915
plot