Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29890 and AO356_29895 are separated by 407 nucleotidesAO356_29895 and AO356_29900 are separated by 188 nucleotidesAO356_29900 and AO356_29905 are separated by 268 nucleotidesAO356_29905 and AO356_29910 are separated by 293 nucleotides AO356_29890: AO356_29890 - phosphodiesterase, at 6,950,868 to 6,952,121 _29890 AO356_29895: AO356_29895 - AraC family transcriptional regulator, at 6,952,529 to 6,953,494 _29895 AO356_29900: AO356_29900 - L-fucose dehydrogenase, at 6,953,683 to 6,954,867 _29900 AO356_29905: AO356_29905 - hypothetical protein, at 6,955,136 to 6,955,807 _29905 AO356_29910: AO356_29910 - hypothetical protein, at 6,956,101 to 6,956,556 _29910
Group Condition AO356_29890 AO356_29895 AO356_29900 AO356_29905 AO356_29910
survival 4C survival; 360 hrs -0.1 -0.3 +0.1 -0.2 -0.5
stress nitrate 200 mM -0.2 -0.1 -0.4 -0.2 -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.2 -0.3 -0.3 -0.3 +0.2
stress KB-half, Pseudo5 supernatant -0.1 -0.3 -0.0 -0.2 -0.1
stress Sisomicin 0.001 mg/ml -0.0 -0.2 -0.2 +0.1 -0.4
motility outer cut, LB soft agar motility assay +0.1 -0.3 -0.4 +0.2 -0.1
lb LB -0.1 -0.1 -0.1 +0.1 -0.4
pH Minimal media pH7 +0.1 -0.2 +0.0 +0.0 -0.5
temperature LB 30C +0.2 -0.2 -0.0 -0.1 -0.4
motility outer cut, LB soft agar motility assay -0.0 -0.2 -0.1 -0.4 +0.3
anaerobic Nitrate reduction with yeast extract -0.2 -0.2 -0.6 +0.3 +0.2
carbon source L-Lysine (C) +0.0 +0.3 -0.4 -0.2 -0.1
pH Minimal media pH9 -0.1 -0.1 -0.2 +0.2 -0.1
carbon source D-Fructose (C) +0.1 -0.3 -0.1 +0.1 -0.2
stress Rifampicin 0.0024 mg/ml -0.0 +0.2 +0.1 -0.0 -0.5
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.0 -0.1 -0.3 -0.1 +0.2
temperature LB 30C +0.1 -0.1 -0.0 +0.2 -0.4
motility outer cut, LB soft agar motility assay -0.3 -0.3 -0.1 +0.2 +0.3
carbon source Carbon source D-Glucose 10 mM -0.1 -0.2 -0.2 +0.1 +0.3
carbon source D,L-Lactate (C) +0.1 -0.1 -0.3 +0.1 +0.2
nitrogen source L-Isoleucine (N) +0.1 +0.2 +0.2 -0.1 -0.3
stress copper (II) chloride 2.5 mM -0.1 -0.3 +0.3 +0.2 +0.0
carbon source Carbon source D-Mannitol 2.5 mM -0.0 -0.2 +0.0 -0.2 +0.5
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.0 -0.2 -0.1 +0.0 +0.5
stress Lomefloxacin 0.0005 mM -0.2 +0.5 +0.0 +0.3 -0.3
nitrogen source Inosine (N) +0.1 +0.2 -0.2 +0.1 +0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 +0.1 +0.1 +0.3 +0.2
carbon source Carbon source D-Glucose 10 mM -0.0 +0.2 +0.1 +0.1 +0.3
carbon source Carbon source Sucrose 10 mM -0.0 +0.0 +0.2 +0.1 +0.4
nitrogen source Urea (N) +0.1 +0.1 +0.1 +0.2 +0.1
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