Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29795 and AO356_29800 are separated by 231 nucleotidesAO356_29800 and AO356_29805 are separated by 57 nucleotidesAO356_29805 and AO356_29810 overlap by 4 nucleotidesAO356_29810 and AO356_29815 are separated by 32 nucleotides AO356_29795: AO356_29795 - amino acid transporter, at 6,927,998 to 6,928,804 _29795 AO356_29800: AO356_29800 - AraC family transcriptional regulator, at 6,929,036 to 6,929,836 _29800 AO356_29805: AO356_29805 - FAD-dependent oxidoreductase, at 6,929,894 to 6,931,318 _29805 AO356_29810: AO356_29810 - cupin, at 6,931,315 to 6,931,656 _29810 AO356_29815: AO356_29815 - spermidine/putrescine ABC transporter substrate-binding protein, at 6,931,689 to 6,932,774 _29815
Group Condition AO356_29795 AO356_29800 AO356_29805 AO356_29810 AO356_29815
stress copper (II) chloride 2.5 mM -1.3 -0.1 +0.1 -0.1 -0.3
stress Cephalothin 2 mg/ml -0.8 +0.2 -0.2 -0.9 +0.0
stress acetate 40 mM -1.6 +0.2 -0.2 -0.1 +0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.4 +0.2 -0.1 -0.6 -0.2
stress Nalidixic 0.004 mg/ml -1.0 +0.1 -0.3 +0.1 -0.0
carbon source Putrescine (C) +0.3 +0.0 -0.3 -1.1 +0.0
stress Fusidic 0.1 mg/ml -1.3 +0.2 -0.1 +0.2 +0.0
stress methylglyoxal 0.016 vol% -1.3 -0.1 -0.1 +0.2 +0.2
stress perchlorate 75 mM -1.0 -0.0 -0.1 +0.1 +0.2
stress Benzalkonium Chloride 0.016 mg/ml -1.1 +0.3 -0.1 -0.4 +0.3
stress Benzalkonium Chloride 0.008 mg/ml -1.1 +0.0 +0.1 -0.1 +0.2
anaerobic Nitrate reduction with yeast extract -1.5 -0.1 +0.1 +0.3 +0.6
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.9 +0.2 -0.2 -1.4 +0.0
motility outer cut, LB soft agar motility assay -0.9 +0.6 -0.1 -0.2 +0.3
carbon source Carbon source D-Mannitol 2.5 mM +0.7 -0.1 -0.2 -0.2 -0.3
motility outer cut, LB soft agar motility assay +1.1 -0.2 +0.2 -0.4 -0.6
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.8 +0.2 -0.1 -0.5 +0.0
survival 4C survival; 672 hrs +0.8 +0.1 -0.0 -0.6 +0.1
stress Cholin acetate 20 mM +1.0 +0.1 -0.3 -0.1 -0.1
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +1.0 +0.1 +0.0 -0.6 +0.2
carbon source Carbon source Sucrose 2.5 mM +0.9 +0.1 +0.1 -0.2 -0.2
nitrogen source Carnitine Hydrochloride (N) +0.9 -0.2 -0.3 +0.3 +0.0
stress Nickel (II) chloride 0.625 mM +0.8 -0.2 +0.1 +0.5 -0.2
resistance 20 mM putrescine +0.8 +0.5 +0.0 -0.4 +0.2
nitrogen source D-Serine (N) +0.8 +0.2 -0.2 -0.3 +0.5
stress Nickel (II) chloride 0.625 mM +1.0 +0.1 -0.0 +0.3 -0.2
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.9 +0.4 +0.2 -0.4 +0.1
carbon source L-Lysine (C) -0.2 +0.1 +0.4 +1.3 +0.1
stress KB-half, Pseudo5 supernatant +0.7 +0.2 +0.3 +0.7 +0.1
carbon source L-Lysine (C) +0.7 -0.2 +0.2 +1.5 +0.1
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