Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29670 and AO356_29675 are separated by 72 nucleotidesAO356_29675 and AO356_29680 are separated by 10 nucleotidesAO356_29680 and AO356_29685 are separated by 39 nucleotidesAO356_29685 and AO356_29690 are separated by 144 nucleotides AO356_29670: AO356_29670 - argininosuccinate lyase, at 6,902,083 to 6,903,510 _29670 AO356_29675: AO356_29675 - ABC transporter permease, at 6,903,583 to 6,904,461 _29675 AO356_29680: AO356_29680 - ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA, at 6,904,472 to 6,905,236 _29680 AO356_29685: AO356_29685 - ABC transporter substrate-binding protein, at 6,905,276 to 6,906,100 _29685 AO356_29690: AO356_29690 - polysaccharide deacetylase, at 6,906,245 to 6,907,087 _29690
Group Condition AO356_29670 AO356_29675 AO356_29680 AO356_29685 AO356_29690
stress Cholin acetate 40 mM -0.3 -0.1 N.D. -0.4 -0.8
stress Cholin acetate 20 mM -0.1 -0.4 N.D. -0.4 -0.7
carbon source L-Glutamic (C) -0.5 -0.4 N.D. -0.0 -0.4
carbon source Carnitine Hydrochloride (C) -0.1 -0.3 N.D. -0.4 -0.3
carbon source D-Alanine (C) -0.2 -0.4 N.D. -0.4 -0.0
carbon source Carbon source Sucrose 5 mM +0.3 -1.0 N.D. -0.2 -0.0
carbon source Cytidine (C) -0.5 -0.3 N.D. +0.1 -0.2
carbon source NAG (C) -0.3 -0.4 N.D. -0.5 +0.2
stress Choline chloride 300 mM +0.2 -0.3 N.D. -0.3 -0.4
stress D-Cycloserine 0.1 mg/ml +0.2 -0.5 N.D. -0.4 +0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.3 -0.2 N.D. -0.7 +0.1
carbon source L-Proline (C) -0.3 +0.2 N.D. -0.6 +0.3
carbon source Carbon source Sucrose 5 mM +0.4 -0.5 N.D. -0.1 +0.1
lb LB +0.2 -0.3 N.D. -0.2 +0.3
carbon source a-Ketoglutaric (C) -0.2 +0.4 N.D. -0.3 +0.2
carbon source pyruvate (C) -0.3 +0.4 N.D. -0.3 +0.2
stress nitrate 200 mM -0.2 -0.4 N.D. +0.1 +0.5
motility outer cut, LB soft agar motility assay +0.1 -0.5 N.D. +0.5 +0.1
survival 4C survival; 24 hrs +0.1 -0.4 N.D. +0.5 -0.1
nitrogen source Inosine (N) +0.0 -0.4 N.D. +0.6 +0.2
stress syringaldehyde 10 mM -0.1 +0.4 N.D. -0.4 +0.4
carbon source L-Arabinose (C) -0.4 +0.7 N.D. -0.1 +0.2
stress syringaldehyde 5 mM +0.1 +0.6 N.D. -0.4 +0.1
stress methylglyoxal 0.016 vol% +0.3 +0.4 N.D. -0.3 +0.2
stress nitrite 10 mM +0.5 -0.2 N.D. +0.2 +0.3
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.2 +0.2 N.D. +0.3 +0.4
stress Vanillin 1.25 mM +0.2 +0.3 N.D. -0.1 +0.6
pH Minimal media pH6 +0.4 +0.5 N.D. -0.1 +0.3
stress Chlorite 0.04 mM +0.3 +0.5 N.D. +0.0 +0.4
motility outer cut, LB soft agar motility assay +0.4 +0.5 N.D. +0.3 +0.1
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