Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29595 and AO356_29600 are separated by 446 nucleotidesAO356_29600 and AO356_29605 are separated by 133 nucleotidesAO356_29605 and AO356_29610 are separated by 57 nucleotidesAO356_29610 and AO356_29615 are separated by 61 nucleotides AO356_29595: AO356_29595 - trehalose synthase, at 6,884,021 to 6,886,087 _29595 AO356_29600: AO356_29600 - MFS transporter, at 6,886,534 to 6,887,832 _29600 AO356_29605: AO356_29605 - hypothetical protein, at 6,887,966 to 6,889,519 _29605 AO356_29610: AO356_29610 - AraC family transcriptional regulator, at 6,889,577 to 6,890,593 _29610 AO356_29615: AO356_29615 - transporter, at 6,890,655 to 6,891,902 _29615
Group Condition AO356_29595 AO356_29600 AO356_29605 AO356_29610 AO356_29615
carbon source L-Proline (C) +0.0 -0.0 -0.0 -0.7 -0.2
carbon source L-Lysine (C) +0.0 -0.3 -0.0 -0.5 +0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.3 -0.4 -0.1 -0.2 -0.3
temperature LB 20C -0.2 +0.1 -0.1 -0.3 -0.1
stress Chlorite 0.08 mM -0.1 -0.1 -0.2 -0.3 +0.2
pH Minimal media pH9 -0.0 +0.1 +0.1 -0.5 -0.3
stress Cisplatin 0.0032 mg/ml +0.1 +0.1 +0.0 -0.3 -0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.1 -0.4 -0.0 -0.2 +0.3
carbon source L-Asparagine (C) +0.0 -0.0 +0.2 -0.5 +0.2
carbon source D-Xylose (C) -0.1 -0.2 +0.1 +0.2 -0.2
carbon source D-Trehalose (C) -0.2 +0.3 -0.1 -0.3 +0.2
stress Lomefloxacin 0.0005 mM +0.2 +0.3 -0.0 +0.0 -0.6
carbon source Putrescine (C) +0.2 -0.1 -0.1 -0.3 +0.3
stress copper (II) chloride 2.5 mM -0.2 +0.0 +0.1 +0.4 -0.3
motility outer cut, LB soft agar motility assay -0.0 +0.2 -0.0 +0.3 -0.3
motility outer cut, LB soft agar motility assay +0.3 +0.1 -0.0 +0.2 -0.4
anaerobic Nitrate reduction with yeast extract +0.2 -0.2 +0.2 -0.7 +0.7
nitrogen source L-Phenylalanine (N) +0.0 -0.2 -0.1 +0.4 +0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.3 +0.1 -0.1 +0.3 -0.3
stress syringaldehyde 5 mM +0.0 -0.2 +0.1 +0.3 +0.2
carbon source Carbon source D,L-Lactate 10 mM +0.2 -0.1 +0.1 +0.6 -0.2
stress Benzalkonium Chloride 0.016 mg/ml +0.2 -0.1 +0.0 -0.1 +0.6
stress Cisplatin 0.0032 mg/ml +0.1 -0.1 +0.0 +0.4 +0.2
carbon source D-Fructose (C) +0.1 -0.1 -0.1 +0.3 +0.3
stress perchlorate 75 mM +0.0 +0.1 -0.1 +0.7 +0.1
stress Ceftazidime 0.2 mg/ml +0.2 +0.1 +0.3 +0.2 -0.1
motility outer cut, LB soft agar motility assay +0.3 -0.3 -0.0 +1.0 -0.1
stress Chlorite 0.04 mM +0.2 -0.1 -0.1 +0.5 +0.4
stress KB-half, Pseudo5 supernatant +0.2 +0.3 +0.4 +0.8 +0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +0.2 +0.3 +1.2 +0.4
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