Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 198 experiments or choose conditions or try the comparative fitness browser

500 ntAO356_29415 and AO356_29420 are separated by 135 nucleotidesAO356_29420 and AO356_29425 are separated by 198 nucleotidesAO356_29425 and AO356_29430 are separated by 35 nucleotidesAO356_29430 and AO356_29435 are separated by 23 nucleotides AO356_29415: AO356_29415 - transketolase, at 6,843,064 to 6,843,522 _29415 AO356_29420: AO356_29420 - 1-aminocyclopropane-1-carboxylate deaminase, at 6,843,658 to 6,844,674 _29420 AO356_29425: AO356_29425 - AsnC family transcriptional regulator, at 6,844,873 to 6,845,382 _29425 AO356_29430: AO356_29430 - histidine kinase, at 6,845,418 to 6,849,140 _29430 AO356_29435: AO356_29435 - ABC transporter substrate-binding protein, at 6,849,164 to 6,850,276 _29435
Group Condition AO356_29415 AO356_29420 AO356_29425 AO356_29430 AO356_29435
carbon source Glycerol (C) -0.4 -0.7 N.D. +0.0 -0.3
pH Minimal media pH8 -0.5 -0.7 N.D. +0.1 -0.0
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.1 +0.1 N.D. -1.0 -0.3
carbon source Carbon source Sucrose 5 mM +0.4 -1.1 N.D. -0.2 -0.1
pH Minimal media pH8 +0.4 -1.2 N.D. +0.2 -0.3
carbon source Carbon source D-Mannitol 2.5 mM +0.4 -0.5 N.D. -0.4 -0.4
survival 4C survival; 672 hrs -0.5 -0.7 N.D. +0.0 +0.2
carbon source D-Sorbitol (C) -0.1 -1.2 N.D. +0.1 +0.3
carbon source Carbon source Sucrose 10 mM +0.4 -0.9 N.D. +0.1 -0.3
carbon source Glycerol (C) -0.2 -0.5 N.D. +0.4 -0.3
carbon source D-Sorbitol (C) -0.3 -0.6 N.D. +0.4 -0.1
carbon source Carbon source Sucrose 2.5 mM +0.5 -0.6 N.D. -0.0 -0.3
motility outer cut, LB soft agar motility assay -1.0 +0.4 N.D. +0.0 +0.0
carbon source Carbon source Sucrose 10 mM +0.3 -0.6 N.D. +0.2 -0.3
stress Cholin acetate 40 mM +0.6 -0.3 N.D. -0.1 -0.4
carbon source Carbon source D-Mannitol 5 mM +0.9 -0.3 N.D. -0.3 -0.4
carbon source Carbon source D-Mannitol 10 mM +0.6 -0.4 N.D. +0.1 -0.2
carbon source Carbon source D-Mannitol 2.5 mM +0.9 -0.2 N.D. -0.1 -0.4
stress copper (II) chloride 2.5 mM -0.9 +0.6 N.D. +0.3 +0.3
motility outer cut, LB soft agar motility assay +0.5 +0.1 N.D. -0.5 +0.5
carbon source Carbon source Sucrose 2.5 mM +1.0 -0.6 N.D. +0.2 +0.0
motility outer cut, LB soft agar motility assay -0.2 +0.8 N.D. +0.3 -0.2
stress Benzalkonium Chloride 0.016 mg/ml +0.5 +0.2 N.D. +0.4 -0.3
carbon source D-Gluconic Acid (C) +0.2 +1.0 N.D. -0.2 +0.1
carbon source D-Xylose (C) -0.1 +1.2 N.D. +0.1 +0.1
carbon source D-Xylose (C) -0.3 +1.4 N.D. +0.1 +0.2
carbon source Uridine (C) +0.5 +0.7 N.D. +0.1 +0.0
stress Chlorite 0.08 mM +0.7 +0.5 N.D. +0.4 -0.2
stress Lomefloxacin 0.0005 mM +0.2 +0.2 N.D. +0.7 +0.4
stress nitrite 10 mM +0.5 +0.2 N.D. +0.3 +0.6
remove
AO356_29415
plot		 remove
AO356_29420
plot		 remove
AO356_29425		 remove
AO356_29430
plot		 remove
AO356_29435
plot