Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 198 experiments or choose conditions or try the comparative fitness browser

500 ntAO356_29405 and AO356_29410 overlap by 4 nucleotidesAO356_29410 and AO356_29415 are separated by 88 nucleotidesAO356_29415 and AO356_29420 are separated by 135 nucleotidesAO356_29420 and AO356_29425 are separated by 198 nucleotides AO356_29405: AO356_29405 - alpha-ketoglutarate dehydrogenase, at 6,839,902 to 6,842,598 _29405 AO356_29410: AO356_29410 - hypothetical protein, at 6,842,595 to 6,842,975 _29410 AO356_29415: AO356_29415 - transketolase, at 6,843,064 to 6,843,522 _29415 AO356_29420: AO356_29420 - 1-aminocyclopropane-1-carboxylate deaminase, at 6,843,658 to 6,844,674 _29420 AO356_29425: AO356_29425 - AsnC family transcriptional regulator, at 6,844,873 to 6,845,382 _29425
Group Condition AO356_29405 AO356_29410 AO356_29415 AO356_29420 AO356_29425
carbon source D-Fructose (C) -0.0 N.D. -0.2 -0.9 N.D.
carbon source D-Sorbitol (C) +0.1 N.D. -0.1 -1.2 N.D.
survival 4C survival; 672 hrs +0.1 N.D. -0.5 -0.7 N.D.
pH Minimal media pH8 +0.1 N.D. -0.5 -0.7 N.D.
carbon source Glycerol (C) -0.0 N.D. -0.4 -0.7 N.D.
temperature LB 20C -0.0 N.D. -0.3 -0.7 N.D.
pH Minimal media pH8 -0.1 N.D. +0.4 -1.2 N.D.
pH Minimal media pH6 +0.1 N.D. -0.3 -0.7 N.D.
carbon source Carbon source Sucrose 5 mM -0.1 N.D. +0.4 -1.1 N.D.
pH Minimal media pH7 +0.2 N.D. -0.2 -0.8 N.D.
carbon source Carbon source Sucrose 10 mM -0.2 N.D. +0.4 -0.9 N.D.
motility outer cut, LB soft agar motility assay +0.0 N.D. -1.0 +0.4 N.D.
carbon source Carbon source Sucrose 10 mM -0.1 N.D. +0.3 -0.6 N.D.
motility outer cut, LB soft agar motility assay +0.1 N.D. -0.7 +0.3 N.D.
carbon source Carbon source Sucrose 2.5 mM -0.2 N.D. +0.5 -0.6 N.D.
stress Thallium(I) acetate 0.008 mg/ml +0.2 N.D. -0.7 +0.3 N.D.
stress copper (II) chloride 2.5 mM +0.1 N.D. -0.9 +0.6 N.D.
carbon source Carbon source Sucrose 5 mM -0.2 N.D. +0.6 -0.5 N.D.
carbon source Carbon source D-Mannitol 10 mM -0.1 N.D. +0.6 -0.4 N.D.
carbon source Carbon source Sucrose 2.5 mM -0.2 N.D. +1.0 -0.6 N.D.
stress Cholin acetate 40 mM -0.2 N.D. +0.6 -0.3 N.D.
carbon source Carbon source D-Mannitol 5 mM -0.3 N.D. +0.9 -0.3 N.D.
motility outer cut, LB soft agar motility assay -0.1 N.D. -0.2 +0.8 N.D.
carbon source Carbon source D-Mannitol 2.5 mM -0.1 N.D. +0.9 -0.2 N.D.
carbon source D-Gluconic Acid (C) -0.1 N.D. +0.2 +0.8 N.D.
carbon source D-Gluconic Acid (C) -0.1 N.D. +0.2 +1.0 N.D.
stress Chlorite 0.08 mM -0.1 N.D. +0.7 +0.5 N.D.
carbon source D-Xylose (C) -0.1 N.D. -0.1 +1.2 N.D.
carbon source D-Xylose (C) +0.0 N.D. -0.3 +1.4 N.D.
carbon source Uridine (C) -0.0 N.D. +0.5 +0.7 N.D.
remove
AO356_29405
plot		 remove
AO356_29410
plot		 remove
AO356_29415		 remove
AO356_29420
plot		 remove
AO356_29425
plot