Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29400 and AO356_29405 are separated by 548 nucleotidesAO356_29405 and AO356_29410 overlap by 4 nucleotidesAO356_29410 and AO356_29415 are separated by 88 nucleotidesAO356_29415 and AO356_29420 are separated by 135 nucleotides AO356_29400: AO356_29400 - peptidase M20, at 6,838,199 to 6,839,353 _29400 AO356_29405: AO356_29405 - alpha-ketoglutarate dehydrogenase, at 6,839,902 to 6,842,598 _29405 AO356_29410: AO356_29410 - hypothetical protein, at 6,842,595 to 6,842,975 _29410 AO356_29415: AO356_29415 - transketolase, at 6,843,064 to 6,843,522 _29415 AO356_29420: AO356_29420 - 1-aminocyclopropane-1-carboxylate deaminase, at 6,843,658 to 6,844,674 _29420
Group Condition AO356_29400 AO356_29405 AO356_29410 AO356_29415 AO356_29420
pH Minimal media pH8 -0.6 -0.1 N.D. +0.4 -1.2
survival 4C survival; 672 hrs -0.3 +0.1 N.D. -0.5 -0.7
carbon source D-Fructose (C) -0.1 -0.0 N.D. -0.2 -0.9
pH Minimal media pH8 -0.1 +0.1 N.D. -0.5 -0.7
carbon source D-Sorbitol (C) +0.0 +0.1 N.D. -0.1 -1.2
carbon source L-Isoleucine (C) -0.5 -0.1 N.D. +0.1 -0.7
carbon source Carbon source Sucrose 5 mM -0.2 -0.1 N.D. +0.4 -1.1
pH Minimal media pH7 -0.1 +0.2 N.D. -0.2 -0.8
carbon source Carbon source Sucrose 10 mM -0.2 -0.2 N.D. +0.4 -0.9
anaerobic Nitrate reduction with yeast extract -0.8 +0.2 N.D. +0.1 -0.3
stress Choline chloride 500 mM -0.8 -0.1 N.D. -0.1 +0.3
stress copper (II) chloride 2.5 mM -0.4 +0.1 N.D. -0.9 +0.6
carbon source succinate (C) +0.5 -0.1 N.D. +0.1 -0.8
stress Thallium(I) acetate 0.008 mg/ml -0.2 +0.2 N.D. -0.7 +0.3
stress Cholin acetate 40 mM -0.5 -0.2 N.D. +0.6 -0.3
motility outer cut, LB soft agar motility assay +0.2 +0.0 N.D. -1.0 +0.4
carbon source Carbon source Sucrose 5 mM -0.2 -0.2 N.D. +0.6 -0.5
carbon source Carbon source Sucrose 2.5 mM +0.0 -0.2 N.D. +0.5 -0.6
carbon source Carbon source D-Mannitol 10 mM -0.3 -0.1 N.D. +0.6 -0.4
carbon source Carbon source Sucrose 2.5 mM -0.3 -0.2 N.D. +1.0 -0.6
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.6 -0.1 N.D. +0.5 +0.4
motility outer cut, LB soft agar motility assay -0.2 -0.1 N.D. -0.2 +0.8
carbon source Carbon source D-Mannitol 5 mM +0.1 -0.3 N.D. +0.9 -0.3
carbon source Carbon source D-Mannitol 2.5 mM +0.1 -0.1 N.D. +0.9 -0.2
stress Chlorite 0.08 mM -0.3 -0.1 N.D. +0.7 +0.5
carbon source D-Gluconic Acid (C) -0.0 -0.1 N.D. +0.2 +1.0
carbon source D-Gluconic Acid (C) +0.3 -0.1 N.D. +0.2 +0.8
carbon source D-Xylose (C) +0.1 +0.0 N.D. -0.3 +1.4
carbon source Uridine (C) +0.1 -0.0 N.D. +0.5 +0.7
carbon source D-Xylose (C) +0.5 -0.1 N.D. -0.1 +1.2
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