Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29310 and AO356_29315 are separated by 79 nucleotidesAO356_29315 and AO356_29320 overlap by 4 nucleotidesAO356_29320 and AO356_29325 are separated by 416 nucleotidesAO356_29325 and AO356_29330 are separated by 144 nucleotides AO356_29310: AO356_29310 - aliphatic sulfonate ABC transporter substrate-binding protein, at 6,816,391 to 6,817,401 _29310 AO356_29315: AO356_29315 - acyl-CoA dehydrogenase, at 6,817,481 to 6,818,668 _29315 AO356_29320: AO356_29320 - dihydrofolate reductase, at 6,818,665 to 6,819,624 _29320 AO356_29325: AO356_29325 - TonB-dependent receptor, at 6,820,041 to 6,822,173 _29325 AO356_29330: AO356_29330 - ABC transporter substrate-binding protein, at 6,822,318 to 6,823,295 _29330
Group Condition AO356_29310 AO356_29315 AO356_29320 AO356_29325 AO356_29330
carbon source D-Trehalose (C) -0.0 -1.1 -0.7 -0.0 -0.0
stress Nickel (II) chloride 0.625 mM -0.1 -0.7 -0.7 -0.1 -0.1
stress KB-half, Pseudo5 supernatant +0.0 -2.5 +1.3 -0.1 -0.4
stress Aluminum chloride 5 mM -0.0 -1.4 +0.0 -0.2 +0.1
carbon source Ethanol (C) -0.2 -0.6 -0.3 +0.1 -0.3
carbon source Glycerol (C) -0.1 -0.8 -0.4 +0.0 -0.1
motility outer cut, LB soft agar motility assay -0.5 +0.1 -0.8 -0.1 -0.1
stress Benzalkonium Chloride 0.008 mg/ml -0.0 -0.7 -0.2 +0.0 -0.4
nitrogen source Adenosine (N) +0.2 -1.3 -0.2 +0.0 +0.1
lb LB -0.1 -0.5 -0.8 +0.2 -0.1
nitrogen source Urea (N) -0.0 -1.0 -0.2 -0.2 +0.1
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.1 -0.8 -0.5 +0.0 +0.1
stress Cobalt chloride 0.08 mM +0.3 -1.2 -0.1 +0.0 -0.2
stress acetate 40 mM -0.1 -1.1 +0.1 +0.1 -0.1
stress Chloramphenicol 0.005 mg/ml +0.3 -1.1 -0.2 -0.0 -0.0
nitrogen source Adenine (N) +0.1 -0.7 -0.3 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.3 -1.1 +0.6 -0.2 -0.6
stress Spectinomycin 0.0125 mg/ml -0.1 -0.9 +0.3 +0.0 +0.2
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.1 -0.8 +0.2 -0.0 +0.2
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.1 -0.6 +0.6 -0.2 -0.1
carbon source Carbon source D-Glucose 10 mM -0.2 -0.6 +0.3 -0.1 +0.3
resistance 20 mM putrescine -0.3 -0.7 +0.5 +0.0 +0.1
carbon source L-Lysine (C) +0.1 +0.4 -0.7 +0.1 -0.1
carbon source D,L-Lactate (C) -0.4 +0.8 +0.1 +0.0 -0.4
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.0 +0.3 +0.9 -0.0 -0.5
stress Benzethonium chloride 0.025 mM +0.1 -0.3 +0.8 +0.1 -0.0
stress 1-ethyl-3-methylimidazolium lysine 10 mM +0.1 +0.9 -0.1 -0.0 +0.2
stress nitrite 10 mM -0.1 +0.1 +0.9 -0.1 +0.2
stress D-Cycloserine 0.1 mg/ml +0.2 +1.0 +0.3 -0.1 +0.1
anaerobic Nitrate reduction with yeast extract +0.2 +1.4 +0.5 -0.4 -0.1
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