Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29100 and AO356_29105 overlap by 10 nucleotidesAO356_29105 and AO356_29110 overlap by 4 nucleotidesAO356_29110 and AO356_29115 are separated by 63 nucleotidesAO356_29115 and AO356_29120 overlap by 1 nucleotides AO356_29100: AO356_29100 - epimerase, at 6,765,503 to 6,766,510 _29100 AO356_29105: AO356_29105 - fumarylacetoacetate hydrolase, at 6,766,501 to 6,767,493 _29105 AO356_29110: AO356_29110 - cupin, at 6,767,490 to 6,768,062 _29110 AO356_29115: AO356_29115 - Vanillate O-demethylase oxidoreductase, at 6,768,126 to 6,769,079 _29115 AO356_29120: AO356_29120 - vanillate monooxygenase, at 6,769,079 to 6,770,122 _29120
Group Condition AO356_29100 AO356_29105 AO356_29110 AO356_29115 AO356_29120
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.7 -3.2 N.D. -0.3 -0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 -1.7 -0.7 N.D. -0.3 -0.0
motility outer cut, LB soft agar motility assay -0.4 -1.9 N.D. -0.5 +0.1
survival 4C survival; 360 hrs +0.2 -0.5 N.D. -1.0 -0.9
nitrogen source Inosine (N) +0.1 -1.0 N.D. -0.8 -0.3
carbon source m-Inositol (C) -0.3 -0.3 N.D. -1.0 -0.4
carbon source Carbon source Sucrose 5 mM -0.5 -0.6 N.D. -0.4 -0.4
survival 4C survival; 672 hrs -0.4 -0.6 N.D. -0.9 +0.0
carbon source L-Glutamine (C) -0.6 -0.1 N.D. -0.5 -0.5
motility outer cut, LB soft agar motility assay -0.8 -0.7 N.D. +0.5 -0.6
stress KB-half, Pseudo5 supernatant -0.1 -0.9 N.D. -0.8 +0.3
motility outer cut, LB soft agar motility assay -0.8 -1.4 N.D. +1.0 -0.3
carbon source D-Gluconic Acid (C) +0.3 -1.3 N.D. +0.1 -0.2
stress Choline chloride 500 mM -0.1 +0.6 N.D. -0.9 -0.8
anaerobic Nitrate reduction with yeast extract +0.5 +0.2 N.D. -0.3 -1.3
carbon source Tween 20 (C) +0.4 -0.5 N.D. -0.6 -0.2
carbon source Carbon source Sucrose 10 mM +0.5 -1.0 N.D. +0.1 -0.4
stress Chlorite 0.08 mM -0.0 -1.4 N.D. +0.8 -0.1
stress nitrite 10 mM +0.6 -0.4 N.D. +0.3 -1.0
stress copper (II) chloride 2.5 mM +0.4 +0.5 N.D. -0.1 -0.8
carbon source Carbon source D-Glucose 10 mM +1.0 +0.0 N.D. -0.3 -0.7
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.2 +0.8 N.D. +0.1 -0.6
stress Nickel (II) chloride 0.625 mM +0.6 -0.7 N.D. +0.0 +0.4
stress Bacitracin 2 mg/ml +0.4 -0.6 N.D. +0.7 -0.2
carbon source succinate (C) +0.6 +0.5 N.D. -0.5 -0.1
stress nitrate 200 mM -0.4 +0.6 N.D. +0.8 -0.4
carbon source Carnitine Hydrochloride (C) -0.6 +0.6 N.D. +0.4 +0.3
carbon source D-Galactose (C) +0.5 +0.6 N.D. -0.5 +0.3
stress Lomefloxacin 0.0005 mM -0.8 +0.9 N.D. -0.2 +1.0
stress Benzalkonium Chloride 0.016 mg/ml +1.5 +0.6 N.D. +0.1 +0.2
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