Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_29065 and AO356_29070 are separated by 485 nucleotidesAO356_29070 and AO356_29075 are separated by 16 nucleotidesAO356_29075 and AO356_29080 are separated by 26 nucleotidesAO356_29080 and AO356_29085 are separated by 99 nucleotides AO356_29065: AO356_29065 - hypothetical protein, at 6,757,801 to 6,758,931 _29065 AO356_29070: AO356_29070 - succinate-semialdehyde dehydrogenase, at 6,759,417 to 6,760,886 _29070 AO356_29075: AO356_29075 - dihydrodipicolinate synthetase, at 6,760,903 to 6,761,919 _29075 AO356_29080: AO356_29080 - ornithine cyclodeaminase, at 6,761,946 to 6,762,956 _29080 AO356_29085: AO356_29085 - LysR family transcriptional regulator, at 6,763,056 to 6,763,982 _29085
Group Condition AO356_29065 AO356_29070 AO356_29075 AO356_29080 AO356_29085
stress Lomefloxacin 0.0005 mM -0.3 -0.1 -0.5 -2.4 +0.4
survival 4C survival; 360 hrs -0.1 -0.9 -0.2 -0.4 -0.4
carbon source D,L-Lactate (C) +0.1 +0.1 -0.7 -1.3 +0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 -0.5 -1.3 +0.0 +0.2
stress Nickel (II) chloride 0.625 mM +0.2 -0.1 -0.6 -0.7 -0.0
nitrogen source L-tyrosine (N) +0.2 -0.2 +0.1 -0.8 -0.4
temperature LB 10C +0.0 -0.6 -0.4 -0.3 +0.3
nitrogen source Putrescine (N) -0.2 +0.2 +0.2 -0.8 -0.4
stress Nickel (II) chloride 0.625 mM +0.4 -0.4 -0.1 -0.3 -0.6
stress Cholin acetate 40 mM -0.1 -1.3 +0.1 -0.0 +0.5
stress Cholin acetate 20 mM -0.3 +0.4 -0.5 -0.3 +0.1
nitrogen source Thymine (N) -0.0 +0.3 +0.2 -0.9 -0.2
motility outer cut, LB soft agar motility assay +0.1 -0.6 -0.5 +0.3 -0.1
stress Ceftazidime 0.2 mg/ml -0.0 +0.2 -0.1 -0.9 +0.3
carbon source acetate (C) +0.1 +0.7 -0.4 -0.2 -0.3
stress perchlorate 75 mM -0.2 +0.4 -0.5 +0.5 +0.0
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.1 +0.1 -0.5 +0.2 +0.6
motility outer cut, LB soft agar motility assay +0.7 +0.5 -0.2 -0.4 -0.2
stress Paraquat dichloride 0.0625 mg/ml -0.0 +0.6 +0.7 -0.6 -0.2
stress nitrite 10 mM +0.0 -0.5 +0.5 +0.3 +0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.2 -0.5 +0.6 +0.8 -0.1
temperature LB 30C +0.2 -0.2 -0.3 +0.7 +0.3
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.3 +0.5 +0.5 -0.1 +0.4
anaerobic Nitrate reduction with yeast extract -0.2 +0.0 +0.9 +0.2 +0.5
carbon source Carbon source Sucrose 5 mM +0.2 +0.3 +0.3 +0.8 +0.1
motility outer cut, LB soft agar motility assay -0.3 +0.7 +0.9 +0.3 +0.1
motility outer cut, LB soft agar motility assay +0.3 +0.2 +0.1 +0.9 +0.2
stress Chlorite 0.08 mM -0.1 +0.6 +0.3 +0.9 +0.3
stress KB-half, Pseudo5 supernatant +0.1 -0.1 +0.8 +1.0 +0.4
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +0.4 +1.2 +0.6 +0.7
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