Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_28950 and AO356_28955 are separated by 105 nucleotidesAO356_28955 and AO356_28960 are separated by 268 nucleotidesAO356_28960 and AO356_28965 are separated by 59 nucleotidesAO356_28965 and AO356_28970 are separated by 8 nucleotides AO356_28950: AO356_28950 - LysR family transcriptional regulator, at 6,731,036 to 6,731,926 _28950 AO356_28955: AO356_28955 - hypothetical protein, at 6,732,032 to 6,732,301 _28955 AO356_28960: AO356_28960 - FMN reductase, at 6,732,570 to 6,733,133 _28960 AO356_28965: AO356_28965 - monooxygenase, at 6,733,193 to 6,734,380 _28965 AO356_28970: AO356_28970 - Fis family transcriptional regulator, at 6,734,389 to 6,735,492 _28970
Group Condition AO356_28950 AO356_28955 AO356_28960 AO356_28965 AO356_28970
stress copper (II) chloride 2.5 mM -0.5 +0.2 N.D. +0.2 -1.6
stress Chlorite 0.08 mM +0.2 -0.1 N.D. -1.3 -0.4
carbon source Putrescine (C) -0.1 -0.4 N.D. +0.1 -1.1
stress Tetracycline 0.0001 mg/ml -0.4 -0.6 N.D. +0.0 -0.6
stress Benzalkonium Chloride 0.016 mg/ml -0.4 -0.1 N.D. -0.2 -0.8
carbon source Cytidine (C) +0.0 -0.4 N.D. -0.2 -0.9
stress nitrite 10 mM -0.6 -0.7 N.D. -0.2 +0.3
pH Minimal media pH8 -0.3 -0.7 N.D. +0.3 -0.5
stress Benzalkonium Chloride 0.008 mg/ml -0.2 +0.3 N.D. -0.2 -0.7
carbon source L-Lysine (C) -0.0 +0.3 N.D. +0.2 -1.3
nitrogen source Carnitine Hydrochloride (N) +0.3 -1.1 N.D. +0.1 -0.2
carbon source L-Aspartic Acid (C) +0.2 +0.4 N.D. -0.3 -0.9
stress KB-half, Pseudo5 supernatant -0.1 -0.5 N.D. +0.8 -0.7
carbon source Carbon source Sucrose 10 mM -0.3 -0.3 N.D. -0.5 +0.6
temperature LB 10C +0.2 -0.1 N.D. +0.3 -0.8
stress Chlorite 0.04 mM +0.2 +0.4 N.D. -0.5 -0.4
carbon source L-Glutamic (C) +0.2 +0.4 N.D. +0.0 -0.8
stress Thallium(I) acetate 0.008 mg/ml -0.4 +0.7 N.D. +0.0 -0.5
carbon source D-Glucose (C) -0.1 +0.7 N.D. -0.4 -0.3
carbon source Carbon source D-Mannitol 2.5 mM +0.2 -0.7 N.D. +0.4 +0.1
carbon source Glycerol (C) +0.2 +0.3 N.D. +0.3 -0.8
anaerobic Nitrate reduction with yeast extract +0.2 +0.8 N.D. -0.2 -0.6
carbon source D-Trehalose (C) +0.3 +0.4 N.D. +0.1 -0.7
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.2 +0.4 N.D. +0.6 -0.6
stress 1-ethyl-3-methylimidazolium acetate 5 mM +0.2 +0.0 N.D. -0.5 +0.8
motility outer cut, LB soft agar motility assay +0.6 +0.5 N.D. -0.4 -0.3
stress Ceftazidime 0.2 mg/ml -0.2 -0.1 N.D. -0.2 +1.1
nitrogen source Inosine (N) +0.1 -0.4 N.D. -0.1 +1.2
stress Cholin acetate 40 mM +0.1 +0.4 N.D. -0.6 +1.0
motility outer cut, LB soft agar motility assay -0.1 +0.3 N.D. +0.1 +0.9
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