Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_28845 and AO356_28850 are separated by 43 nucleotidesAO356_28850 and AO356_28855 are separated by 271 nucleotidesAO356_28855 and AO356_28860 overlap by 1 nucleotidesAO356_28860 and AO356_28865 overlap by 32 nucleotides AO356_28845: AO356_28845 - ferrichrome ABC transporter, at 6,708,296 to 6,709,051 _28845 AO356_28850: AO356_28850 - chemotaxis protein, at 6,709,095 to 6,711,056 _28850 AO356_28855: AO356_28855 - structural protein MipA, at 6,711,328 to 6,712,125 _28855 AO356_28860: AO356_28860 - transcriptional regulator, at 6,712,125 to 6,712,811 _28860 AO356_28865: AO356_28865 - histidine kinase, at 6,712,780 to 6,714,174 _28865
Group Condition AO356_28845 AO356_28850 AO356_28855 AO356_28860 AO356_28865
motility outer cut, LB soft agar motility assay -1.7 -0.4 -0.0 -1.7 -0.5
stress nitrate 200 mM -1.5 -0.2 -0.0 -0.6 +0.0
stress methylglyoxal 0.016 vol% -1.9 +0.1 -0.1 +0.1 -0.2
stress Benzalkonium Chloride 0.016 mg/ml -0.8 -0.1 -0.2 -0.9 +0.0
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.9 -0.1 -0.0 -0.7 -0.1
carbon source L-Lysine (C) -0.2 +0.2 -0.5 -1.3 -0.0
carbon source D-Glucose (C) -1.1 -0.1 -0.0 -0.5 -0.0
stress 1-ethyl-3-methylimidazolium acetate 5 mM -1.6 +0.2 +0.2 -0.4 +0.0
motility outer cut, LB soft agar motility assay -0.2 -0.5 +0.1 -0.7 -0.2
carbon source Ethanol (C) -0.9 +0.0 -0.3 -0.3 +0.1
carbon source Carbon source D,L-Lactate 10 mM -0.9 -0.6 +0.1 -0.1 +0.1
stress Sisomicin 0.001 mg/ml -1.0 -0.1 +0.0 -0.7 +0.4
stress nitrite 10 mM -0.6 -0.9 -0.1 +0.3 -0.1
nitrogen source L-Isoleucine (N) -1.0 -0.3 +0.2 -0.2 +0.2
nitrogen source Adenosine (N) -0.4 +0.3 -0.3 -0.4 -0.3
carbon source Carbon source Sucrose 10 mM -0.9 -0.3 +0.2 -0.2 +0.3
carbon source Carbon source Sucrose 10 mM -1.0 +0.0 +0.2 +0.1 +0.2
carbon source pyruvate (C) +0.6 +0.1 +0.1 -0.7 -0.3
carbon source succinate (C) +0.6 +0.2 +0.1 -0.9 +0.0
stress Cobalt chloride 0.08 mM +1.0 -0.2 -0.1 -0.5 -0.2
survival 4C survival; 192 hrs +0.3 +0.4 +0.0 -0.6 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 -0.3 +0.6 -0.5 +0.8
stress KB-half, Pseudo5 supernatant -0.3 -0.6 +0.6 +0.3 +0.5
stress Nalidixic 0.004 mg/ml +0.6 -0.2 -0.2 +0.6 -0.2
motility outer cut, LB soft agar motility assay +0.3 -0.3 -0.3 +0.7 +0.2
carbon source D-Glucose (C) +0.5 +0.4 +0.2 -0.4 +0.1
stress Thallium(I) acetate 0.008 mg/ml +0.7 -0.4 -0.1 +0.8 +0.1
stress Choline chloride 300 mM +1.0 -0.2 +0.0 +0.2 -0.1
anaerobic Nitrate reduction with yeast extract +1.0 -0.5 +0.6 +0.6 -0.4
stress copper (II) chloride 2.5 mM +1.0 +0.0 +0.2 +0.7 +0.3
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