Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_28780 and AO356_28785 are separated by 608 nucleotidesAO356_28785 and AO356_28790 are separated by 14 nucleotidesAO356_28790 and AO356_28795 are separated by 28 nucleotidesAO356_28795 and AO356_28800 are separated by 46 nucleotides AO356_28780: AO356_28780 - host specificity protein, at 6,691,913 to 6,692,803 _28780 AO356_28785: AO356_28785 - decarboxylase, at 6,693,412 to 6,694,806 _28785 AO356_28790: AO356_28790 - cysteine synthase, at 6,694,821 to 6,695,864 _28790 AO356_28795: AO356_28795 - hypothetical protein, at 6,695,893 to 6,697,041 _28795 AO356_28800: AO356_28800 - hypothetical protein, at 6,697,088 to 6,698,935 _28800
Group Condition AO356_28780 AO356_28785 AO356_28790 AO356_28795 AO356_28800
stress Sisomicin 0.001 mg/ml N.D. -0.2 -0.5 -0.4 -0.4
survival 4C survival; 1152 hrs N.D. -0.3 +0.2 -0.2 -1.1
nitrogen source D-Serine (N) N.D. -0.1 -0.1 -0.6 -0.3
stress copper (II) chloride 2.5 mM N.D. -0.1 -0.5 -0.4 -0.2
stress Chlorite 0.04 mM N.D. -0.0 +0.0 -0.7 -0.3
carbon source Carbon source D,L-Lactate 10 mM N.D. -0.1 -0.1 -0.4 -0.3
stress Benzalkonium Chloride 0.016 mg/ml N.D. -0.1 -0.2 -0.3 -0.3
carbon source L-Isoleucine (C) N.D. -0.1 +0.1 -0.5 -0.4
pH Minimal media pH8 N.D. -0.0 -0.4 -0.5 -0.0
stress nitrite 10 mM N.D. +0.3 +0.2 -0.9 -0.4
stress 1-ethyl-3-methylimidazolium acetate 20 mM N.D. +0.1 -0.6 -0.5 +0.2
carbon source D-Alanine (C) N.D. +0.1 -0.1 -0.4 -0.4
stress Benzalkonium Chloride 0.008 mg/ml N.D. +0.1 -0.4 -0.3 -0.2
motility outer cut, LB soft agar motility assay N.D. +0.1 -0.5 -0.1 -0.2
nitrogen source Uridine (N) N.D. -0.3 +0.2 -0.5 -0.1
nitrogen source L-tyrosine (N) N.D. +0.0 +0.1 -0.6 -0.2
carbon source acetate (C) N.D. -0.4 +0.2 -0.3 -0.1
carbon source D-Fructose (C) N.D. -0.1 -0.1 -0.6 +0.3
anaerobic Nitrate reduction with yeast extract N.D. -0.5 -0.0 -0.4 +0.4
nitrogen source Inosine (N) N.D. -0.3 +0.3 -0.4 -0.1
carbon source Carbon source D-Mannitol 2.5 mM N.D. -0.3 +0.1 +0.1 -0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. +0.2 -0.2 -0.4 +0.2
nitrogen source L-Isoleucine (N) N.D. +0.1 +0.3 -0.4 -0.1
stress Thallium(I) acetate 0.008 mg/ml N.D. -0.1 -0.5 +0.5 +0.1
carbon source L-Histidine (C) N.D. -0.2 -0.2 +0.4 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. +0.0 +0.5 -0.2 -0.2
motility outer cut, LB soft agar motility assay N.D. +0.2 +0.1 -0.4 +0.3
carbon source L-Arginine (C) N.D. +0.1 +0.3 +0.4 -0.2
stress syringaldehyde 5 mM N.D. +0.1 +0.2 +0.5 -0.1
stress Nickel (II) chloride 0.625 mM N.D. +0.6 +0.1 +0.4 +0.5
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