Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_28695 and AO356_28700 are separated by 216 nucleotidesAO356_28700 and AO356_28705 are separated by 82 nucleotidesAO356_28705 and AO356_28710 are separated by 11 nucleotidesAO356_28710 and AO356_28715 are separated by 82 nucleotides AO356_28695: AO356_28695 - IclR family transcriptional regulator, at 6,667,468 to 6,668,220 _28695 AO356_28700: AO356_28700 - hypothetical protein, at 6,668,437 to 6,669,762 _28700 AO356_28705: AO356_28705 - hypothetical protein, at 6,669,845 to 6,671,194 _28705 AO356_28710: AO356_28710 - aldehyde dehydrogenase, at 6,671,206 to 6,672,627 _28710 AO356_28715: AO356_28715 - amino acid permease, at 6,672,710 to 6,674,158 _28715
Group Condition AO356_28695 AO356_28700 AO356_28705 AO356_28710 AO356_28715
survival 4C survival; 360 hrs -2.7 +0.1 -0.2 -1.5 -0.0
carbon source acetate (C) -2.6 -0.4 -0.3 -0.2 -0.2
carbon source Carbon source Sucrose 10 mM -1.0 -0.1 -0.1 -2.0 -0.2
anaerobic Nitrate reduction with yeast extract -3.3 +0.1 +0.6 -0.2 -0.5
stress Cholin acetate 40 mM -1.2 -0.4 -0.2 -0.8 -0.1
carbon source Carbon source D-Mannitol 10 mM -1.7 -0.4 -0.1 -0.3 -0.2
stress acetate 40 mM -1.1 -0.1 -0.5 -1.2 +0.3
carbon source Carbon source Sucrose 5 mM -1.7 -0.3 +0.1 -0.2 -0.4
nitrogen source L-tyrosine (N) -1.6 +0.2 -0.2 -0.9 +0.1
carbon source Carbon source D-Mannitol 5 mM -0.8 -0.2 -0.1 -0.9 -0.4
survival 4C survival; 1152 hrs -2.1 +0.2 +0.0 -0.4 -0.1
nitrogen source Inosine (N) -0.9 -0.3 +0.1 -1.3 -0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.4 -0.3 -0.4 -1.4 +0.3
stress Lomefloxacin 0.0005 mM -0.8 -1.4 -0.2 -0.1 +0.3
stress Cholin acetate 20 mM -1.2 +0.3 -0.0 -1.4 +0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -1.8 +0.3 -0.1 -0.2 -0.1
carbon source Carbon source Sucrose 10 mM -1.4 +0.1 -0.0 -0.7 +0.0
carbon source L-Lactate (C) -2.2 -0.0 +0.3 +0.2 -0.0
stress Nickel (II) chloride 0.625 mM -0.8 +0.1 -0.2 -1.1 +0.3
pH Minimal media pH9 -1.7 +0.2 +0.2 -0.1 -0.1
carbon source Carbon source Sucrose 5 mM -1.5 -0.1 +0.2 +0.4 -0.2
stress 1-ethyl-3-methylimidazolium acetate 10 mM -1.3 -0.2 -0.2 +0.5 +0.1
carbon source m-Inositol (C) -0.8 -0.6 -0.1 +0.7 -0.2
stress methylglyoxal 0.016 vol% +0.6 -0.1 +0.3 -1.3 -0.2
motility outer cut, LB soft agar motility assay -1.5 +0.3 -0.6 +1.1 +0.0
survival 4C survival; 24 hrs -1.2 +0.3 -0.1 +0.7 -0.1
stress copper (II) chloride 2.5 mM +1.0 +0.3 -0.2 -0.6 -0.3
stress KB-half, Pseudo5 supernatant +0.8 -0.1 +1.1 -0.2 -0.2
stress Paraquat dichloride 0.0625 mg/ml +0.8 +0.6 -0.1 +0.6 -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +1.9 -0.7 +1.7 +0.1 -0.2
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