Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_28535 and AO356_28540 are separated by 17 nucleotidesAO356_28540 and AO356_28545 are separated by 78 nucleotidesAO356_28545 and AO356_28550 are separated by 53 nucleotidesAO356_28550 and AO356_28555 are separated by 4 nucleotides AO356_28535: AO356_28535 - mannitol dehydrogenase, at 6,631,865 to 6,633,322 _28535 AO356_28540: AO356_28540 - D-mannose transporter (from data), at 6,633,340 to 6,634,632 _28540 AO356_28545: AO356_28545 - alcohol dehydrogenase, at 6,634,711 to 6,635,742 _28545 AO356_28550: AO356_28550 - bifunctional D-altronate/D-mannonate dehydratase, at 6,635,796 to 6,637,007 _28550 AO356_28555: AO356_28555 - ketodeoxygluconokinase, at 6,637,012 to 6,638,013 _28555
Group Condition AO356_28535 AO356_28540 AO356_28545 AO356_28550 AO356_28555
carbon source D-Mannose (C) -1.6 -2.0 N.D. -1.9 -1.0
stress Lomefloxacin 0.0005 mM -1.0 -0.2 N.D. -0.7 +0.2
nitrogen source L-Phenylalanine (N) -0.2 -0.4 N.D. -0.3 -0.3
carbon source L-Leucine (C) -0.5 -0.0 N.D. -0.3 -0.3
carbon source D-Glucose (C) +0.2 -0.3 N.D. -0.4 -0.5
motility outer cut, LB soft agar motility assay +0.4 -0.1 N.D. -0.7 -0.6
stress Benzalkonium Chloride 0.016 mg/ml -0.7 +0.0 N.D. +0.2 -0.5
stress methylglyoxal 0.016 vol% +0.1 -0.2 N.D. -0.3 -0.4
survival 4C survival; 1152 hrs -0.0 -0.1 N.D. +0.2 -0.8
anaerobic Nitrate reduction with yeast extract -0.1 -0.3 N.D. +0.2 -0.3
carbon source acetate (C) +0.0 -0.0 N.D. +0.3 -0.8
temperature LB 20C -0.2 -0.3 N.D. +0.2 -0.2
carbon source Carbon source D-Mannitol 2.5 mM -0.2 -0.1 N.D. +0.2 -0.4
stress Rifampicin 0.0024 mg/ml -0.6 -0.1 N.D. +0.2 +0.2
stress nitrate 200 mM -0.4 +0.1 N.D. -0.3 +0.3
motility outer cut, LB soft agar motility assay +0.4 -0.4 N.D. -0.5 +0.2
stress acetate 40 mM -0.3 +0.1 N.D. -0.3 +0.4
motility outer cut, LB soft agar motility assay +0.1 +0.2 N.D. -0.5 +0.1
carbon source Carbon source D-Mannitol 5 mM -0.0 +0.1 N.D. +0.4 -0.6
carbon source D-Glucose (C) +0.2 -0.2 N.D. +0.2 -0.3
stress Vanillin 2.5 mM +0.2 -0.3 N.D. -0.1 +0.2
carbon source Carbon source D-Mannitol 5 mM -0.4 -0.0 N.D. +0.4 +0.3
stress Cobalt chloride 0.08 mM +0.3 -0.1 N.D. -0.3 +0.5
carbon source Fumarate (C) +0.4 -0.0 N.D. +0.3 -0.2
motility outer cut, LB soft agar motility assay +0.5 +0.0 N.D. -0.5 +0.6
carbon source Carbon source Sucrose 10 mM -0.1 +0.2 N.D. +0.5 +0.2
carbon source Carbon source Sucrose 2.5 mM +0.2 +0.2 N.D. +0.5 -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.5 -0.2 N.D. +0.3 +0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.4 +0.0 N.D. +0.1 +1.1
stress KB-half, Pseudo5 supernatant +0.9 -0.2 N.D. +0.7 +0.0
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