Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_28335 and AO356_28340 are separated by 307 nucleotidesAO356_28340 and AO356_28345 are separated by 504 nucleotidesAO356_28345 and AO356_28350 are separated by 51 nucleotidesAO356_28350 and AO356_28355 are separated by 39 nucleotides AO356_28335: AO356_28335 - peptidase, at 6,588,578 to 6,590,299 _28335 AO356_28340: AO356_28340 - GABA permease, at 6,590,607 to 6,592,007 _28340 AO356_28345: AO356_28345 - TetR family transcriptional regulator, at 6,592,512 to 6,593,123 _28345 AO356_28350: AO356_28350 - spermidine/putrescine ABC transporter substrate-binding protein, at 6,593,175 to 6,594,278 _28350 AO356_28355: AO356_28355 - hypothetical protein, at 6,594,318 to 6,595,655 _28355
Group Condition AO356_28335 AO356_28340 AO356_28345 AO356_28350 AO356_28355
carbon source D-Lactate (C) -0.4 -0.1 -1.1 -0.1 -0.1
nitrogen source D-Alanine (N) -0.3 -0.2 -0.4 -0.3 -0.6
carbon source Putrescine (C) -0.1 -0.3 -1.2 -0.1 -0.1
stress Nickel (II) chloride 0.625 mM -0.2 -0.1 -0.8 -0.1 -0.4
motility outer cut, LB soft agar motility assay -0.6 -0.5 -0.2 -0.2 +0.0
nitrogen source D-Serine (N) -0.0 +0.0 -1.2 -0.0 -0.1
carbon source Carbon source D-Mannitol 5 mM +0.0 -0.1 -0.8 -0.1 -0.4
resistance 20 mM putrescine -0.4 +0.3 -0.9 +0.0 -0.3
carbon source L-Leucine (C) -0.4 -0.0 -0.6 +0.0 -0.3
carbon source L-Histidine (C) -0.4 -0.1 -0.8 +0.3 -0.3
carbon source Carbon source D-Mannitol 10 mM -0.4 -0.2 -0.6 +0.1 +0.1
anaerobic Nitrate reduction with yeast extract +0.1 -1.1 +0.1 +0.2 -0.4
carbon source D-Xylose (C) -0.4 -0.5 -0.3 +0.1 +0.1
carbon source L-Histidine (C) +0.0 +0.2 -1.1 +0.1 -0.3
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.1 -0.1 -0.7 +0.2 -0.2
temperature LB 10C +0.3 -0.2 -0.9 +0.1 -0.1
stress syringaldehyde 5 mM -0.2 -0.2 +0.2 +0.2 -0.7
stress Sisomicin 0.001 mg/ml -0.2 -0.6 +0.6 +0.1 -0.2
stress copper (II) chloride 2.5 mM -0.2 +0.1 +0.8 -0.2 -0.3
stress Aluminum chloride 5 mM -0.1 -0.1 +0.8 -0.2 -0.2
carbon source Carbon source D-Mannitol 2.5 mM +0.2 -0.2 +0.7 -0.2 -0.3
stress KB-half, Pseudo5 supernatant +0.7 +0.2 -0.0 -0.5 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.5 +0.2 +0.5 +0.2 -0.2
stress Chloramphenicol 0.005 mg/ml -0.2 -0.2 +0.8 -0.1 +0.1
stress Paraquat dichloride 0.0625 mg/ml -0.1 -0.1 +0.9 -0.1 -0.2
stress Chlorite 0.08 mM +0.1 +0.2 +0.8 -0.2 -0.5
stress Spectinomycin 0.025 mg/ml +0.3 -0.4 +0.6 -0.1 +0.2
lb LB +0.5 +0.1 +0.4 +0.2 -0.3
stress Cholin acetate 20 mM -0.1 +0.4 +0.8 -0.1 +0.0
stress Paraquat dichloride 0.0625 mg/ml +0.0 +0.3 +1.3 -0.3 -0.2
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