Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_27965 and AO356_27970 are separated by 285 nucleotidesAO356_27970 and AO356_27975 are separated by 671 nucleotidesAO356_27975 and AO356_27980 are separated by 5 nucleotidesAO356_27980 and AO356_27985 are separated by 254 nucleotides AO356_27965: AO356_27965 - benzaldehyde dehydrogenase, at 6,383,392 to 6,384,864 _27965 AO356_27970: AO356_27970 - Fis family transcriptional regulator, at 6,385,150 to 6,386,925 _27970 AO356_27975: AO356_27975 - hypothetical protein, at 6,387,597 to 6,387,923 _27975 AO356_27980: AO356_27980 - AraC family transcriptional regulator, at 6,387,929 to 6,388,849 _27980 AO356_27985: AO356_27985 - sorbitol dehydrogenase, at 6,389,104 to 6,389,877 _27985
Group Condition AO356_27965 AO356_27970 AO356_27975 AO356_27980 AO356_27985
stress nitrate 200 mM -1.3 -0.2 N.D. -0.2 -0.6
stress Nalidixic 0.004 mg/ml -0.9 +0.0 N.D. -0.8 -0.3
motility outer cut, LB soft agar motility assay -1.0 -0.2 N.D. -0.2 -0.5
stress nitrite 10 mM -1.3 -0.4 N.D. +0.0 +0.3
carbon source D-Trehalose (C) -1.1 +0.2 N.D. -0.0 -0.1
pH Minimal media pH6 -0.7 -0.6 N.D. +0.2 +0.0
carbon source L-Lysine (C) -1.4 +0.2 N.D. +0.4 -0.2
carbon source Carbon source D-Mannitol 10 mM -1.2 +0.2 N.D. -0.1 +0.2
lb LB -0.4 +0.2 N.D. +0.2 -0.8
motility outer cut, LB soft agar motility assay +1.0 -0.1 N.D. -1.2 -0.4
carbon source L-Histidine (C) -1.1 +0.3 N.D. +0.5 -0.4
stress Aluminum chloride 5 mM -1.0 +0.2 N.D. +0.2 -0.1
anaerobic Nitrate reduction with yeast extract -0.1 -1.1 N.D. +0.4 +0.2
stress Chlorite 0.04 mM -0.7 +0.2 N.D. -0.2 +0.3
nitrogen source D-Glucosamine Hydrochloride (N) +0.6 -0.2 N.D. -0.3 -0.5
stress Benzalkonium Chloride 0.008 mg/ml -0.9 +0.1 N.D. +0.0 +0.4
motility outer cut, LB soft agar motility assay +1.0 -0.1 N.D. -1.2 +0.0
motility outer cut, LB soft agar motility assay +0.1 +0.1 N.D. -0.8 +0.6
temperature LB 30C -0.5 -0.3 N.D. +0.1 +0.8
stress Cobalt chloride 0.08 mM +0.8 +0.2 N.D. +0.1 -0.7
carbon source L-Histidine (C) -0.7 +0.1 N.D. +0.7 +0.3
carbon source D-Alanine (C) +1.0 -0.2 N.D. -0.3 +0.1
nitrogen source Cytosine (N) +1.1 -0.1 N.D. -0.1 -0.3
stress KB-half, Pseudo5 supernatant -1.0 -0.5 N.D. +1.3 +0.9
carbon source Carnitine Hydrochloride (C) +0.8 -0.0 N.D. +0.4 -0.3
nitrogen source nitrite (N) +0.9 -0.0 N.D. -0.3 +0.4
stress Thallium(I) acetate 0.008 mg/ml -0.4 +0.4 N.D. +0.7 +0.4
pH Minimal media pH6 +0.8 -0.2 N.D. +0.2 +0.4
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.8 -0.4 N.D. +1.5 +1.0
stress copper (II) chloride 2.5 mM +1.1 +0.3 N.D. +0.4 +0.4
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