Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_27520 and AO356_27525 are separated by 106 nucleotidesAO356_27525 and AO356_27530 are separated by 200 nucleotidesAO356_27530 and AO356_27535 are separated by 122 nucleotidesAO356_27535 and AO356_27540 are separated by 1 nucleotides AO356_27520: AO356_27520 - betaine-aldehyde dehydrogenase, at 6,272,395 to 6,273,849 _27520 AO356_27525: AO356_27525 - cytochrome B, at 6,273,956 to 6,274,519 _27525 AO356_27530: AO356_27530 - hypothetical protein, at 6,274,720 to 6,278,454 _27530 AO356_27535: AO356_27535 - channel protein TolC, at 6,278,577 to 6,279,884 _27535 AO356_27540: AO356_27540 - hemolysin secretion protein D, at 6,279,886 to 6,281,208 _27540
Group Condition AO356_27520 AO356_27525 AO356_27530 AO356_27535 AO356_27540
stress KB-half, Pseudo5 supernatant -0.3 -0.4 -0.2 -0.5 -0.4
stress Choline chloride 500 mM -0.3 -0.1 -0.1 -0.6 -0.4
nitrogen source nitrite (N) -0.6 -0.5 +0.1 -0.1 -0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.4 +0.1 -0.2 -0.0 -0.8
nitrogen source Urea (N) +0.0 -0.2 -0.1 -0.2 -0.8
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.0 -0.6 -0.4 -0.5 +0.2
carbon source L-Histidine (C) -0.4 -0.0 +0.0 -0.8 -0.1
stress Paraquat dichloride 0.0625 mg/ml -0.4 +0.4 -0.1 -0.4 -0.8
anaerobic Nitrate reduction with yeast extract +0.2 +0.2 -0.3 -0.6 -0.5
stress Lomefloxacin 0.0005 mM -0.3 +0.1 -0.2 -0.4 -0.3
motility outer cut, LB soft agar motility assay +0.2 -0.2 +0.3 -0.2 -0.9
survival 4C survival; 672 hrs -0.3 -0.2 -0.0 +0.3 -0.7
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.6 -0.0 +0.0 -0.7 +0.5
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.5 -0.1 +0.2 +0.4 -0.7
nitrogen source D-Serine (N) -0.1 +0.0 -0.0 -0.8 +0.5
stress Nickel (II) chloride 0.625 mM -0.5 +0.4 +0.1 -0.0 -0.4
stress copper (II) chloride 2.5 mM +0.1 +0.2 +0.3 -0.7 -0.2
carbon source L-Isoleucine (C) -0.3 +0.0 +0.1 -0.4 +0.5
carbon source D-Gluconic Acid (C) +0.0 +0.6 +0.2 -0.3 -0.4
carbon source D-Xylose (C) -0.5 +0.3 +0.2 -0.2 +0.3
stress Sisomicin 0.001 mg/ml +0.2 +0.3 +0.4 -0.1 -0.6
carbon source Carbon source Sucrose 5 mM +0.3 -0.5 -0.1 +0.2 +0.2
resistance 20 mM putrescine -0.0 -0.4 +0.1 +0.2 +0.5
carbon source L-Arabinose (C) -0.2 +0.4 +0.1 +0.4 -0.3
carbon source Carbon source D-Mannitol 2.5 mM +0.1 -0.4 +0.1 +0.1 +0.6
carbon source pyruvate (C) -0.3 +0.4 +0.2 +0.0 +0.2
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.1 -0.3 +0.2 +0.4 +0.4
carbon source Carbon source Sucrose 10 mM +0.4 -0.4 +0.0 +0.0 +0.8
nitrogen source L-tyrosine (N) +0.5 -0.1 -0.0 +0.2 +0.5
stress nitrate 200 mM +0.4 +0.4 +0.2 +0.5 +0.5
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