Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_27430 and AO356_27435 are separated by 22 nucleotidesAO356_27435 and AO356_27440 are separated by 3 nucleotidesAO356_27440 and AO356_27445 overlap by 4 nucleotidesAO356_27445 and AO356_27450 are separated by 288 nucleotides AO356_27430: AO356_27430 - hypothetical protein, at 6,251,109 to 6,251,804 _27430 AO356_27435: AO356_27435 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, at 6,251,827 to 6,252,720 _27435 AO356_27440: AO356_27440 - 2-keto-4-pentenoate hydratase, at 6,252,724 to 6,253,524 _27440 AO356_27445: AO356_27445 - IclR family transcriptional regulator, at 6,253,521 to 6,254,327 _27445 AO356_27450: AO356_27450 - fumarylacetoacetate hydrolase, at 6,254,616 to 6,255,794 _27450
Group Condition AO356_27430 AO356_27435 AO356_27440 AO356_27445 AO356_27450
carbon source L-Histidine (C) -0.3 +0.1 -0.1 -2.1 -0.2
carbon source D-Xylose (C) +0.0 -0.2 -0.0 -1.4 -0.4
carbon source L-Histidine (C) -0.0 +0.2 -0.0 -1.7 -0.1
carbon source NAG (C) -0.1 +0.2 +0.1 -1.1 -0.5
stress KB-half, Pseudo5 supernatant -0.3 -0.2 -0.5 -0.0 -0.3
carbon source L-Lysine (C) +0.4 -0.2 +0.0 -1.3 -0.2
carbon source L-Proline (C) -0.1 -0.4 +0.0 -0.8 +0.1
carbon source D-Fructose (C) +0.0 -0.5 +0.1 -0.9 +0.0
anaerobic Nitrate reduction with yeast extract -0.3 -0.8 +0.0 -0.1 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.4 -0.0 -0.4 -0.2 -0.2
survival 4C survival; 672 hrs -0.3 -0.5 +0.1 -0.0 -0.4
survival 4C survival; 1152 hrs -0.3 -0.5 +0.1 -0.2 -0.2
carbon source L-Lysine (C) +0.0 -0.3 +0.2 -0.9 -0.0
pH Minimal media pH9 -0.1 -0.1 +0.1 -0.6 -0.4
carbon source Carbon source D,L-Lactate 10 mM -0.5 -0.5 +0.1 -0.1 -0.0
nitrogen source Gly-Glu (N) -0.2 -0.3 +0.1 -0.1 -0.4
carbon source D-Xylose (C) +0.1 -0.1 +0.1 -1.0 +0.1
carbon source L-Proline (C) +0.2 -0.3 +0.0 -0.7 +0.0
carbon source D-Fructose (C) -0.1 -0.1 +0.2 -0.8 -0.0
carbon source D-Lactate (C) -0.1 -0.1 +0.1 -0.8 +0.2
motility outer cut, LB soft agar motility assay +0.2 +0.3 -0.4 -0.6 -0.2
carbon source Putrescine (C) -0.4 +0.1 +0.0 +0.6 -0.4
stress Cisplatin 0.0032 mg/ml +0.4 -0.4 +0.1 +0.2 -0.1
stress Vanillin 1.25 mM +0.2 +0.4 +0.2 -0.4 -0.1
carbon source L-Leucine (C) -0.1 -0.0 +0.1 +0.8 -0.3
stress Lomefloxacin 0.0005 mM +0.5 +0.2 -0.0 -0.4 +0.4
motility outer cut, LB soft agar motility assay +0.0 +0.4 +0.7 -0.3 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 +0.6 +0.4 -0.3 +0.3
carbon source Fumarate (C) +0.1 -0.0 +0.2 +0.7 +0.3
stress Nickel (II) chloride 0.625 mM +0.5 +0.2 +0.1 +0.0 +0.5
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