Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_27275 and AO356_27280 overlap by 4 nucleotidesAO356_27280 and AO356_27285 are separated by 147 nucleotidesAO356_27285 and AO356_27290 overlap by 1 nucleotidesAO356_27290 and AO356_27295 are separated by 23 nucleotides AO356_27275: AO356_27275 - histidine kinase, at 6,217,410 to 6,218,834 _27275 AO356_27280: AO356_27280 - XRE family transcriptional regulator, at 6,218,831 to 6,219,493 _27280 AO356_27285: AO356_27285 - hypothetical protein, at 6,219,641 to 6,219,907 _27285 AO356_27290: AO356_27290 - cytochrome B, at 6,219,907 to 6,220,452 _27290 AO356_27295: AO356_27295 - hypothetical protein, at 6,220,476 to 6,221,744 _27295
Group Condition AO356_27275 AO356_27280 AO356_27285 AO356_27290 AO356_27295
motility outer cut, LB soft agar motility assay -0.0 -2.8 -0.1 -1.1 +0.0
stress Choline chloride 500 mM +0.2 -2.2 +0.0 +0.1 -0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.0 -0.9 -0.5 -0.2 -0.1
anaerobic Nitrate reduction with yeast extract +0.1 -0.8 +0.1 -1.3 +0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.2 -1.9 -0.6 +0.3 +0.4
lb LB -0.0 -1.5 -0.2 -0.3 +0.4
carbon source L-Isoleucine (C) -0.0 -1.7 +0.1 +0.0 -0.0
motility outer cut, LB soft agar motility assay +0.1 -1.6 -0.0 +0.1 -0.0
pH Minimal media pH9 -0.3 -1.1 +0.3 -0.4 +0.2
temperature LB 30C +0.0 -1.4 -0.0 +0.1 +0.0
stress Chloramphenicol 0.005 mg/ml -0.0 -1.3 +0.0 -0.0 +0.2
carbon source Carbon source Sucrose 10 mM +0.1 -0.4 -0.9 +0.3 -0.1
survival 4C survival; 360 hrs -0.4 -0.3 -1.0 +0.1 +0.5
carbon source D-Ribose (C) -0.0 -1.2 -0.0 +0.1 +0.2
stress Cobalt chloride 0.08 mM +0.0 -0.8 -0.4 +0.3 +0.1
stress Cephalothin 2 mg/ml +0.3 -0.7 +0.2 -0.1 -0.3
stress Chlorite 0.04 mM +0.1 -0.6 -0.5 +0.5 -0.2
stress Benzalkonium Chloride 0.016 mg/ml +0.2 -1.2 +0.0 +0.3 +0.4
stress Cisplatin 0.0032 mg/ml +0.2 +0.7 -1.1 -0.1 -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 -0.7 +0.2 +0.1 +0.4
stress Cisplatin 0.0032 mg/ml +0.4 +0.4 -0.4 +0.3 -0.3
carbon source succinate (C) +0.2 +0.2 -0.6 +0.5 +0.2
motility outer cut, LB soft agar motility assay +0.3 +0.3 -0.9 +0.5 +0.3
stress Paraquat dichloride 0.0625 mg/ml +0.3 +0.2 +0.5 +0.5 -0.6
carbon source D-Lactate (C) +0.2 +0.6 -0.5 +0.4 +0.2
stress acetate 40 mM +0.4 +0.7 -0.3 +0.5 -0.3
nitrogen source Urea (N) -0.4 +2.6 -0.4 -0.4 -0.0
carbon source L-Asparagine (C) +0.2 +0.8 +0.6 +0.0 +0.0
carbon source D-Sorbitol (C) +0.3 +1.0 +0.4 +0.1 -0.1
stress Sisomicin 0.001 mg/ml +0.3 +2.0 -0.2 +0.3 +0.4
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