Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_27270 and AO356_27275 are separated by 144 nucleotidesAO356_27275 and AO356_27280 overlap by 4 nucleotidesAO356_27280 and AO356_27285 are separated by 147 nucleotidesAO356_27285 and AO356_27290 overlap by 1 nucleotides AO356_27270: AO356_27270 - MFS transporter, at 6,215,847 to 6,217,265 _27270 AO356_27275: AO356_27275 - histidine kinase, at 6,217,410 to 6,218,834 _27275 AO356_27280: AO356_27280 - XRE family transcriptional regulator, at 6,218,831 to 6,219,493 _27280 AO356_27285: AO356_27285 - hypothetical protein, at 6,219,641 to 6,219,907 _27285 AO356_27290: AO356_27290 - cytochrome B, at 6,219,907 to 6,220,452 _27290
Group Condition AO356_27270 AO356_27275 AO356_27280 AO356_27285 AO356_27290
motility outer cut, LB soft agar motility assay +0.2 -0.0 -2.8 -0.1 -1.1
lb LB -0.0 -0.0 -1.5 -0.2 -0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.0 +0.2 -1.9 -0.6 +0.3
stress Choline chloride 500 mM -0.1 +0.2 -2.2 +0.0 +0.1
anaerobic Nitrate reduction with yeast extract +0.2 +0.1 -0.8 +0.1 -1.3
carbon source L-Isoleucine (C) -0.1 -0.0 -1.7 +0.1 +0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 +0.0 -0.9 -0.5 -0.2
pH Minimal media pH9 +0.0 -0.3 -1.1 +0.3 -0.4
carbon source D-Ribose (C) -0.2 -0.0 -1.2 -0.0 +0.1
motility outer cut, LB soft agar motility assay +0.1 +0.1 -1.6 -0.0 +0.1
survival 4C survival; 360 hrs +0.2 -0.4 -0.3 -1.0 +0.1
stress Chloramphenicol 0.005 mg/ml +0.3 -0.0 -1.3 +0.0 -0.0
temperature LB 30C +0.2 +0.0 -1.4 -0.0 +0.1
stress Benzalkonium Chloride 0.016 mg/ml -0.2 +0.2 -1.2 +0.0 +0.3
carbon source Carbon source Sucrose 10 mM -0.0 +0.1 -0.4 -0.9 +0.3
stress Chlorite 0.04 mM -0.2 +0.1 -0.6 -0.5 +0.5
stress Cobalt chloride 0.08 mM +0.3 +0.1 -0.5 -0.6 +0.2
stress perchlorate 75 mM -0.3 +0.0 -0.6 +0.5 +0.1
stress Cisplatin 0.0032 mg/ml +0.0 +0.2 +0.7 -1.1 -0.1
carbon source L-Alanine (C) -0.0 +0.3 +0.2 -0.8 +0.2
motility outer cut, LB soft agar motility assay -0.2 +0.3 +0.3 -0.9 +0.5
carbon source L-Arabinose (C) +0.2 +0.3 -0.2 -0.4 +0.5
carbon source D-Lactate (C) -0.2 +0.2 +0.6 -0.5 +0.4
stress Cisplatin 0.0032 mg/ml +0.0 +0.4 +0.4 -0.4 +0.3
stress acetate 40 mM +0.1 +0.4 +0.7 -0.3 +0.5
nitrogen source Urea (N) +0.1 -0.4 +2.6 -0.4 -0.4
carbon source D-Sorbitol (C) -0.0 +0.3 +1.0 +0.4 +0.1
carbon source L-Asparagine (C) +0.1 +0.2 +0.8 +0.6 +0.0
stress Paraquat dichloride 0.0625 mg/ml +0.2 +0.3 +0.2 +0.5 +0.5
stress Sisomicin 0.001 mg/ml -0.4 +0.3 +2.0 -0.2 +0.3
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