Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_27080 and AO356_27085 are separated by 257 nucleotidesAO356_27085 and AO356_27090 are separated by 343 nucleotidesAO356_27090 and AO356_27095 are separated by 27 nucleotidesAO356_27095 and AO356_27100 are separated by 35 nucleotides AO356_27080: AO356_27080 - alcohol dehydrogenase, at 6,174,983 to 6,176,008 _27080 AO356_27085: AO356_27085 - LysR family transcriptional regulator, at 6,176,266 to 6,177,180 _27085 AO356_27090: AO356_27090 - amino acid transporter, at 6,177,524 to 6,178,159 _27090 AO356_27095: AO356_27095 - chemotaxis protein, at 6,178,187 to 6,180,076 _27095 AO356_27100: AO356_27100 - hypothetical protein, at 6,180,112 to 6,180,417 _27100
Group Condition AO356_27080 AO356_27085 AO356_27090 AO356_27095 AO356_27100
stress Nalidixic 0.004 mg/ml N.D. -2.3 +0.0 -0.1 -0.5
stress Lomefloxacin 0.0005 mM N.D. -2.1 -0.1 +0.0 +0.1
motility outer cut, LB soft agar motility assay N.D. +0.5 -0.6 -0.2 -1.4
stress methylglyoxal 0.016 vol% N.D. -2.1 +0.2 -0.0 +0.2
stress Sisomicin 0.001 mg/ml N.D. -0.5 -0.3 -0.0 -0.5
carbon source Carbon source Sucrose 10 mM N.D. +0.0 +0.0 -0.0 -1.3
carbon source Carbon source Sucrose 10 mM N.D. -0.2 -0.4 -0.2 -0.3
carbon source L-Histidine (C) N.D. -0.2 -0.3 +0.1 -0.6
anaerobic Nitrate reduction with yeast extract N.D. -0.1 -0.6 +0.0 -0.4
carbon source Carbon source D-Mannitol 10 mM N.D. -0.1 -0.2 +0.0 -0.6
survival 4C survival; 1152 hrs N.D. +0.3 -0.6 -0.2 -0.3
stress Paraquat dichloride 0.0625 mg/ml N.D. -0.3 +0.2 -0.0 -0.6
stress Cephalothin 2 mg/ml N.D. +0.1 -0.2 +0.0 -0.6
carbon source Carbon source D-Glucose 10 mM N.D. +0.3 -0.4 -0.0 -0.3
nitrogen source L-tyrosine (N) N.D. +0.1 -0.4 +0.2 -0.3
pH Minimal media pH7 N.D. -0.4 +0.0 +0.2 -0.2
stress Aluminum chloride 5 mM N.D. -0.9 +0.2 +0.1 +0.4
carbon source Putrescine (C) N.D. -0.3 -0.3 +0.1 +0.3
stress Cisplatin 0.0032 mg/ml N.D. -0.4 +0.3 -0.1 +0.1
carbon source casaminos (C) N.D. +0.3 -0.2 +0.1 -0.3
stress Nickel (II) chloride 0.625 mM N.D. -0.2 +0.2 +0.2 -0.3
motility outer cut, LB soft agar motility assay N.D. +0.3 +0.5 +0.1 -0.6
stress Cobalt chloride 0.08 mM N.D. -0.5 +0.5 +0.3 +0.0
carbon source D-Fructose (C) N.D. -0.2 +0.5 +0.1 -0.1
stress Chlorite 0.08 mM N.D. +0.3 +0.1 +0.2 -0.3
stress Vanillin 1.25 mM N.D. +0.4 -0.1 +0.2 +0.2
stress Benzalkonium Chloride 0.016 mg/ml N.D. -0.0 +0.4 +0.1 +0.4
stress Vanillin 2.5 mM N.D. +0.6 +0.2 +0.1 +0.1
stress KB-half, Pseudo5 supernatant N.D. +1.0 +0.5 +0.1 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. +0.9 +0.8 +0.1 -0.0
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