Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_27040 and AO356_27045 are separated by 131 nucleotidesAO356_27045 and AO356_27050 are separated by 193 nucleotidesAO356_27050 and AO356_27055 are separated by 93 nucleotidesAO356_27055 and AO356_27060 are separated by 233 nucleotides AO356_27040: AO356_27040 - LysR family transcriptional regulator, at 6,163,005 to 6,163,901 _27040 AO356_27045: AO356_27045 - MFS transporter, at 6,164,033 to 6,165,490 _27045 AO356_27050: AO356_27050 - hypothetical protein, at 6,165,684 to 6,165,962 _27050 AO356_27055: AO356_27055 - DNA helicase UvrD, at 6,166,056 to 6,168,524 _27055 AO356_27060: AO356_27060 - pirin, at 6,168,758 to 6,169,453 _27060
Group Condition AO356_27040 AO356_27045 AO356_27050 AO356_27055 AO356_27060
stress Cisplatin 0.0032 mg/ml -0.1 -0.6 -0.5 -0.2 -0.3
carbon source D-Trehalose (C) +0.2 +0.1 -1.6 -0.3 -0.0
carbon source acetate (C) +0.4 -0.2 -1.4 -0.2 +0.0
carbon source acetate (C) +0.2 -0.3 -0.9 -0.2 -0.0
carbon source D-Galactose (C) +0.2 -0.3 -0.7 -0.2 -0.2
carbon source D-Xylose (C) +0.3 -0.3 -1.0 -0.1 +0.0
carbon source D-Ribose (C) +0.2 -0.2 -0.7 -0.2 -0.2
carbon source D-Gluconic Acid (C) +0.5 -0.4 -0.5 -0.0 -0.2
stress Cobalt chloride 0.08 mM +0.6 -0.3 -0.5 -0.0 -0.3
carbon source D-Lactate (C) +0.4 -0.1 -0.7 +0.1 -0.1
carbon source L-Asparagine (C) +0.3 -0.3 -0.5 -0.1 +0.1
carbon source Carbon source D-Glucose 10 mM +0.3 -0.1 -0.6 -0.1 +0.3
carbon source Carbon source Sucrose 10 mM +0.6 +0.0 -0.9 -0.0 +0.1
carbon source D-Xylose (C) +0.7 -0.2 -0.5 -0.1 +0.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.3 +0.4 -0.6 -0.1 +0.1
stress nitrite 10 mM -0.2 -0.2 +0.8 -0.2 +0.0
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.5 +0.1 -0.5 +0.2 +0.0
stress copper (II) chloride 2.5 mM +0.8 +0.2 -0.8 +0.2 -0.1
motility outer cut, LB soft agar motility assay -0.5 +0.4 +0.7 +0.2 -0.0
temperature LB 30C +0.2 +0.1 +0.9 +0.1 -0.3
motility outer cut, LB soft agar motility assay +0.3 +0.1 +0.4 -0.1 +0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.5 -0.2 +0.8 +0.1 -0.1
survival 4C survival; 192 hrs +0.0 -0.1 +1.3 -0.1 +0.1
stress Thallium(I) acetate 0.008 mg/ml +0.6 -0.1 +0.8 +0.1 -0.0
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.1 +0.2 +0.9 +0.1 +0.1
motility outer cut, LB soft agar motility assay +0.6 +0.3 +0.6 -0.3 +0.2
survival 4C survival; 360 hrs +0.0 +0.4 +0.9 +0.0 +0.1
anaerobic Nitrate reduction with yeast extract +0.9 +0.5 +0.0 -0.1 +0.2
stress KB-half, Pseudo5 supernatant +1.6 +0.2 -0.1 -0.2 +0.3
motility outer cut, LB soft agar motility assay +0.9 +0.5 +0.9 +0.1 -0.1
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