Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_27020 and AO356_27025 overlap by 4 nucleotidesAO356_27025 and AO356_27030 are separated by 141 nucleotidesAO356_27030 and AO356_27035 are separated by 112 nucleotidesAO356_27035 and AO356_27040 are separated by 340 nucleotides AO356_27020: AO356_27020 - hemolysin D, at 6,157,409 to 6,158,743 _27020 AO356_27025: AO356_27025 - peptidase, at 6,158,740 to 6,160,518 _27025 AO356_27030: AO356_27030 - alkaline proteinase inhibitor, at 6,160,660 to 6,161,097 _27030 AO356_27035: AO356_27035 - serine 3-dehydrogenase, at 6,161,210 to 6,162,664 _27035 AO356_27040: AO356_27040 - LysR family transcriptional regulator, at 6,163,005 to 6,163,901 _27040
Group Condition AO356_27020 AO356_27025 AO356_27030 AO356_27035 AO356_27040
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.7 -0.7 N.D. -0.3 +0.2
pH Minimal media pH8 -0.8 -0.1 N.D. +0.2 +0.1
motility outer cut, LB soft agar motility assay -0.2 -0.2 N.D. +0.2 -0.5
stress Cisplatin 0.0032 mg/ml -0.5 +0.1 N.D. +0.1 -0.4
stress Cholin acetate 40 mM +0.4 -0.5 N.D. -0.2 -0.2
survival 4C survival; 1152 hrs -0.2 -0.2 N.D. +0.4 -0.3
carbon source pyruvate (C) -0.3 -0.2 N.D. -0.2 +0.5
carbon source acetate (C) -0.2 -0.3 N.D. -0.1 +0.4
motility outer cut, LB soft agar motility assay -0.4 -0.4 N.D. -0.3 +0.9
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.0 -0.3 N.D. -0.3 +0.5
motility outer cut, LB soft agar motility assay -0.2 -0.4 N.D. +0.1 +0.6
carbon source L-Lysine (C) +0.2 -0.4 N.D. -0.2 +0.4
carbon source D,L-Lactate (C) -0.0 -0.3 N.D. -0.2 +0.6
temperature LB 30C -0.5 +0.2 N.D. +0.2 +0.2
stress copper (II) chloride 2.5 mM -0.9 -0.2 N.D. +0.3 +0.8
stress acetate 40 mM -0.3 -0.1 N.D. +0.2 +0.4
stress nitrate 200 mM +0.2 -0.1 N.D. +0.3 -0.3
carbon source D-Glucose (C) -0.2 -0.1 N.D. -0.1 +0.6
nitrogen source D-Serine (N) +0.3 -0.1 N.D. -0.3 +0.3
stress Cephalothin 2 mg/ml +0.4 -0.3 N.D. -0.1 +0.3
carbon source L-Lysine (C) +0.6 -0.1 N.D. +0.1 -0.3
stress syringaldehyde 5 mM +0.5 -0.3 N.D. -0.1 +0.2
carbon source Glycerol (C) +0.3 -0.2 N.D. -0.2 +0.4
pH Minimal media pH6 -0.3 +0.2 N.D. +0.2 +0.3
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.5 -0.3 N.D. +0.1 +0.1
stress Sisomicin 0.001 mg/ml +0.3 -0.3 N.D. +0.2 +0.2
anaerobic Nitrate reduction with yeast extract +0.5 -0.4 N.D. +0.2 +0.9
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.6 +0.2 N.D. -0.0 +0.3
stress Benzalkonium Chloride 0.016 mg/ml +0.1 +0.2 N.D. +0.2 +0.7
stress KB-half, Pseudo5 supernatant +0.4 +0.2 N.D. -0.1 +1.6
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