Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_27015 and AO356_27020 are separated by 14 nucleotidesAO356_27020 and AO356_27025 overlap by 4 nucleotidesAO356_27025 and AO356_27030 are separated by 141 nucleotidesAO356_27030 and AO356_27035 are separated by 112 nucleotides AO356_27015: AO356_27015 - peptidase, at 6,156,045 to 6,157,394 _27015 AO356_27020: AO356_27020 - hemolysin D, at 6,157,409 to 6,158,743 _27020 AO356_27025: AO356_27025 - peptidase, at 6,158,740 to 6,160,518 _27025 AO356_27030: AO356_27030 - alkaline proteinase inhibitor, at 6,160,660 to 6,161,097 _27030 AO356_27035: AO356_27035 - serine 3-dehydrogenase, at 6,161,210 to 6,162,664 _27035
Group Condition AO356_27015 AO356_27020 AO356_27025 AO356_27030 AO356_27035
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.4 -0.7 -0.7 N.D. -0.3
motility outer cut, LB soft agar motility assay +0.1 -0.4 -0.4 N.D. -0.3
pH Minimal media pH8 -0.2 -0.8 -0.1 N.D. +0.2
stress Nickel (II) chloride 0.625 mM -0.2 -0.1 -0.3 N.D. -0.3
stress copper (II) chloride 2.5 mM -0.1 -0.9 -0.2 N.D. +0.3
carbon source pyruvate (C) +0.2 -0.3 -0.2 N.D. -0.2
carbon source L-Lysine (C) -0.2 +0.2 -0.4 N.D. -0.2
anaerobic Nitrate reduction with yeast extract -0.7 +0.5 -0.4 N.D. +0.2
stress Cholin acetate 40 mM -0.3 +0.4 -0.5 N.D. -0.2
temperature LB 37C -0.0 -0.3 -0.3 N.D. +0.2
stress Cisplatin 0.0032 mg/ml -0.2 -0.5 +0.1 N.D. +0.1
carbon source Glycerol (C) -0.2 +0.3 -0.2 N.D. -0.2
temperature LB 30C -0.1 -0.5 +0.2 N.D. +0.2
motility outer cut, LB soft agar motility assay +0.5 -0.2 -0.4 N.D. +0.1
stress Cephalothin 2 mg/ml +0.1 +0.4 -0.3 N.D. -0.1
nitrogen source D-Serine (N) +0.1 +0.3 -0.1 N.D. -0.3
stress Sisomicin 0.001 mg/ml -0.2 +0.3 -0.3 N.D. +0.2
stress syringaldehyde 5 mM +0.0 +0.5 -0.3 N.D. -0.1
stress Vanillin 1.25 mM +0.3 -0.1 -0.3 N.D. +0.2
survival 4C survival; 1152 hrs +0.2 -0.2 -0.2 N.D. +0.4
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.1 +0.5 -0.3 N.D. +0.1
carbon source Inosine (C) +0.4 +0.2 -0.0 N.D. -0.2
carbon source L-Lysine (C) -0.2 +0.6 -0.1 N.D. +0.1
survival 4C survival; 360 hrs +0.1 +0.2 -0.2 N.D. +0.4
nitrogen source L-Leucine (N) +0.2 +0.3 -0.1 N.D. +0.1
stress nitrate 200 mM +0.2 +0.2 -0.1 N.D. +0.3
motility outer cut, LB soft agar motility assay +0.8 -0.2 -0.2 N.D. +0.2
stress Aluminum chloride 5 mM +0.2 +0.6 +0.1 N.D. -0.0
stress KB-half, Pseudo5 supernatant +0.5 +0.4 +0.2 N.D. -0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.5 +0.6 +0.2 N.D. -0.0
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