Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_26950 and AO356_26955 overlap by 4 nucleotidesAO356_26955 and AO356_26960 overlap by 29 nucleotidesAO356_26960 and AO356_26965 are separated by 10 nucleotidesAO356_26965 and AO356_26970 are separated by 192 nucleotides AO356_26950: AO356_26950 - ATP-dependent DNA ligase, at 6,135,358 to 6,137,970 _26950 AO356_26955: AO356_26955 - carboxylate--amine ligase, at 6,137,967 to 6,139,130 _26955 AO356_26960: AO356_26960 - SAM-dependent methyltransferase, at 6,139,102 to 6,140,115 _26960 AO356_26965: AO356_26965 - hypothetical protein, at 6,140,126 to 6,141,511 _26965 AO356_26970: AO356_26970 - sodium:proton antiporter, at 6,141,704 to 6,143,041 _26970
Group Condition AO356_26950 AO356_26955 AO356_26960 AO356_26965 AO356_26970
motility outer cut, LB soft agar motility assay -0.6 -0.4 -0.4 +0.2 -0.5
stress copper (II) chloride 2.5 mM +0.2 -0.8 -0.8 +0.1 -0.4
stress Nickel (II) chloride 0.625 mM -0.5 -0.0 -0.2 -0.2 -0.4
stress Lomefloxacin 0.0005 mM +0.3 -0.7 -0.3 -0.1 -0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.0 -0.6 -0.0 -0.3 -0.1
stress Chlorite 0.08 mM -0.0 -0.5 -0.1 +0.0 -0.4
motility outer cut, LB soft agar motility assay +0.1 +0.1 -0.5 -0.2 -0.3
stress nitrite 10 mM +0.1 +0.1 -0.8 -0.4 +0.3
carbon source L-Lysine (C) -0.1 -0.2 +0.1 +0.2 -0.6
carbon source Cytidine (C) -0.3 +0.1 +0.1 -0.2 -0.3
carbon source L-Arabinose (C) -0.3 -0.1 +0.3 -0.3 -0.3
anaerobic Nitrate reduction with yeast extract +0.2 +0.3 -0.8 -0.2 +0.2
stress Chloramphenicol 0.005 mg/ml -0.1 +0.1 -0.2 -0.4 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 -0.8 +0.0 -0.1 +0.5
stress nitrate 200 mM -0.2 +0.2 -0.7 +0.3 +0.0
stress acetate 40 mM -0.1 +0.3 -0.3 +0.1 -0.2
carbon source Carnitine Hydrochloride (C) -0.1 +0.4 -0.4 -0.2 -0.0
stress KB-half, Pseudo5 supernatant +0.2 -0.4 +0.1 +0.2 -0.3
stress Thallium(I) acetate 0.008 mg/ml +0.0 +0.4 +0.0 -0.3 -0.3
carbon source Carbon source Sucrose 10 mM -0.1 -0.2 +0.2 -0.4 +0.5
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.1 +0.4 -0.3 +0.1 -0.2
stress Doxycycline hyclate 0.0001 mg/ml +0.2 +0.5 -0.3 -0.0 -0.2
stress sodium fluoride 6.25 mM -0.2 +0.4 +0.1 -0.1 +0.2
motility outer cut, LB soft agar motility assay -0.0 +0.4 +0.3 -0.2 -0.3
temperature LB 37C +0.1 +0.3 +0.2 +0.2 -0.3
motility outer cut, LB soft agar motility assay -0.1 +0.8 -0.1 -0.2 +0.2
temperature LB 10C +0.2 +0.2 -0.3 +0.2 +0.3
carbon source Carbon source D-Mannitol 2.5 mM +0.1 +0.5 +0.4 -0.1 -0.0
carbon source D-Glucose (C) -0.0 +0.7 +0.3 -0.1 +0.0
carbon source Carbon source D-Mannitol 10 mM +0.2 +0.4 +0.1 +0.2 +0.2
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