Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_26260 and AO356_26265 overlap by 4 nucleotidesAO356_26265 and AO356_26270 overlap by 4 nucleotidesAO356_26270 and AO356_26275 are separated by 173 nucleotidesAO356_26275 and AO356_26280 are separated by 241 nucleotides AO356_26260: AO356_26260 - histidine kinase, at 5,947,779 to 5,950,091 _26260 AO356_26265: AO356_26265 - LuxR family transcriptional regulator, at 5,950,088 to 5,950,756 _26265 AO356_26270: AO356_26270 - histidine kinase, at 5,950,753 to 5,951,937 _26270 AO356_26275: AO356_26275 - cag pathogenicity island protein Cag5, at 5,952,111 to 5,952,632 _26275 AO356_26280: AO356_26280 - RNA polymerase subunit sigma, at 5,952,874 to 5,953,383 _26280
Group Condition AO356_26260 AO356_26265 AO356_26270 AO356_26275 AO356_26280
stress KB-half, Pseudo5 supernatant -0.0 N.D. -0.6 -0.6 -1.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 N.D. -0.9 -0.8 -0.6
anaerobic Nitrate reduction with yeast extract +0.0 N.D. -0.3 -0.5 +0.2
stress copper (II) chloride 2.5 mM -0.6 N.D. +0.4 -0.2 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.5 N.D. +0.5 -0.2 -0.4
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.3 N.D. +0.3 -0.1 -0.3
stress Lomefloxacin 0.0005 mM -0.5 N.D. +0.4 -0.4 +0.2
motility outer cut, LB soft agar motility assay -0.3 N.D. +0.2 -0.5 +0.3
motility outer cut, LB soft agar motility assay -0.4 N.D. +0.1 +0.3 -0.2
carbon source L-Lysine (C) +0.2 N.D. -0.4 +0.3 -0.3
stress Sisomicin 0.001 mg/ml +0.2 N.D. -0.7 +0.5 +0.2
stress Benzalkonium Chloride 0.016 mg/ml +0.2 N.D. -0.5 +0.0 +0.5
stress Cisplatin 0.0032 mg/ml -0.1 N.D. -0.4 +0.0 +0.5
stress Chlorite 0.08 mM +0.4 N.D. -0.7 +0.2 +0.2
motility outer cut, LB soft agar motility assay -0.1 N.D. +0.5 -0.5 +0.2
carbon source D,L-Lactate (C) +0.3 N.D. -0.3 -0.1 +0.3
carbon source Carbon source Sucrose 10 mM +0.1 N.D. +0.2 +0.3 -0.3
carbon source D-Gluconic Acid (C) +0.3 N.D. -0.2 -0.2 +0.4
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.2 N.D. +0.6 -0.2 +0.1
stress Cephalothin 2 mg/ml -0.3 N.D. +0.2 -0.0 +0.5
stress nitrate 200 mM -0.3 N.D. +0.4 +0.1 +0.1
stress Rifampicin 0.0024 mg/ml +0.1 N.D. -0.4 +0.2 +0.5
stress Thallium(I) acetate 0.008 mg/ml +0.3 N.D. +0.5 -0.1 -0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.3 N.D. +0.6 +0.1 +0.2
carbon source D-Gluconic Acid (C) +0.4 N.D. +0.1 -0.2 +0.4
carbon source a-Ketoglutaric (C) +0.4 N.D. +0.4 -0.1 +0.0
carbon source D-Fructose (C) +0.4 N.D. +0.1 -0.1 +0.4
carbon source D-Glucose (C) +0.5 N.D. +0.1 -0.3 +0.5
stress perchlorate 75 mM +0.2 N.D. +0.0 +0.2 +0.6
stress Ceftazidime 0.2 mg/ml -0.0 N.D. +0.6 -0.1 +0.6
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