Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_25435 and AO356_25440 overlap by 4 nucleotidesAO356_25440 and AO356_25445 are separated by 152 nucleotidesAO356_25445 and AO356_25450 are separated by 36 nucleotidesAO356_25450 and AO356_25455 are separated by 26 nucleotides AO356_25435: AO356_25435 - nodulation protein NolW, at 5,751,575 to 5,752,234 _25435 AO356_25440: AO356_25440 - histidine kinase, at 5,752,231 to 5,753,682 _25440 AO356_25445: AO356_25445 - hypothetical protein, at 5,753,835 to 5,754,116 _25445 AO356_25450: AO356_25450 - LysR family transcriptional regulator, at 5,754,153 to 5,755,094 _25450 AO356_25455: AO356_25455 - transcriptional regulator, at 5,755,121 to 5,756,140 _25455
Group Condition AO356_25435 AO356_25440 AO356_25445 AO356_25450 AO356_25455
carbon source L-Histidine (C) +0.2 -0.1 -0.5 -0.6 -1.3
survival 4C survival; 192 hrs -0.5 -0.6 +0.1 +0.3 -1.2
carbon source L-Lysine (C) -0.5 +0.1 -0.2 -1.0 -0.2
carbon source D-Trehalose (C) -0.2 +0.2 -0.2 -0.6 -0.9
motility outer cut, LB soft agar motility assay +0.2 -0.2 -0.7 -0.6 -0.4
carbon source L-Malic (C) -0.5 -0.0 -0.3 -0.3 -0.5
stress sodium fluoride 6.25 mM -0.3 +0.0 +0.0 +0.1 -1.2
motility outer cut, LB soft agar motility assay +0.5 +0.3 +0.1 -0.1 -2.2
carbon source Carbon source D-Mannitol 10 mM -0.4 +0.1 -0.2 -0.4 -0.4
carbon source Inosine (C) +0.3 -0.3 -0.3 -0.6 -0.3
carbon source Ethanol (C) +0.2 +0.1 -0.1 -0.5 -0.7
carbon source L-Glutamine (C) +0.2 +0.1 +0.0 -0.3 -1.0
anaerobic Nitrate reduction with yeast extract +0.1 -0.2 -2.0 +0.9 +0.3
carbon source L-Malic (C) -0.5 +0.4 -0.1 -0.7 +0.1
carbon source D,L-Lactate (C) -0.2 +0.1 +0.1 -0.9 +0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.1 -0.4 -0.4 +0.5 -0.4
survival 4C survival; 672 hrs +0.1 -0.4 -0.1 +0.3 -0.6
pH Minimal media pH7 +0.1 -0.8 -0.2 +0.1 +0.4
stress Vanillin 2.5 mM +0.2 -0.2 +0.4 -0.4 -0.3
carbon source casaminos (C) +0.3 -0.3 +0.2 +0.2 -0.5
nitrogen source nitrite (N) -0.2 +0.3 -0.3 -0.4 +0.6
carbon source Carnitine Hydrochloride (C) +0.5 -0.7 +0.1 +0.1 +0.1
nitrogen source Carnitine Hydrochloride (N) +0.4 -0.1 -0.0 +0.4 -0.6
stress Cholin acetate 40 mM -0.2 -0.2 -0.3 +0.5 +0.3
temperature LB 10C -0.0 -0.2 +0.4 +0.5 -0.3
stress perchlorate 75 mM +0.2 +0.2 -0.5 -0.2 +0.8
survival 4C survival; 24 hrs +0.5 +0.1 -0.2 +0.5 -0.2
stress Thallium(I) acetate 0.008 mg/ml +0.0 +0.2 +0.5 +0.5 +0.4
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.3 +0.5 +0.2 +0.3 +1.9
stress KB-half, Pseudo5 supernatant +0.6 +0.6 +0.5 +0.8 +1.6
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