Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_25410 and AO356_25415 are separated by 211 nucleotidesAO356_25415 and AO356_25420 are separated by 236 nucleotidesAO356_25420 and AO356_25425 are separated by 149 nucleotidesAO356_25425 and AO356_25430 are separated by 5 nucleotides AO356_25410: AO356_25410 - LysR family transcriptional regulator, at 5,747,023 to 5,747,934 _25410 AO356_25415: AO356_25415 - pyridine nucleotide-disulfide oxidoreductase, at 5,748,146 to 5,749,348 _25415 AO356_25420: AO356_25420 - chemotaxis protein CheY, at 5,749,585 to 5,749,959 _25420 AO356_25425: AO356_25425 - AraC family transcriptional regulator, at 5,750,109 to 5,750,927 _25425 AO356_25430: AO356_25430 - phosphatidylethanolamine-binding protein, at 5,750,933 to 5,751,472 _25430
Group Condition AO356_25410 AO356_25415 AO356_25420 AO356_25425 AO356_25430
stress Bacitracin 2 mg/ml -0.8 +0.0 -0.7 -0.2 -0.1
stress nitrate 200 mM -0.4 -0.2 -0.8 -0.0 -0.3
stress Cephalothin 2 mg/ml -0.2 +0.0 -1.4 -0.0 -0.1
survival 4C survival; 360 hrs -0.7 -0.4 -0.5 +0.0 -0.0
carbon source Carbon source Sucrose 10 mM -0.7 -0.1 -0.5 -0.2 -0.2
stress Benzethonium chloride 0.025 mM -0.5 -0.1 -1.0 +0.2 -0.2
survival 4C survival; 1152 hrs -0.2 -0.0 -0.7 -0.5 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.5 -0.6 -0.4 -0.1 -0.0
stress nitrite 10 mM -0.5 -0.1 -0.5 +0.1 -0.5
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.3 +0.0 -0.8 -0.3 -0.0
motility outer cut, LB soft agar motility assay -0.7 +0.2 -0.7 -0.0 -0.1
stress Sisomicin 0.001 mg/ml -0.8 +0.1 -0.5 +0.0 -0.0
motility outer cut, LB soft agar motility assay -1.0 +0.1 +0.3 -0.4 -0.3
temperature LB 10C -0.6 -0.0 -0.8 -0.1 +0.2
motility outer cut, LB soft agar motility assay -0.5 +0.0 -1.1 +0.6 -0.1
carbon source Carbon source D-Mannitol 5 mM +0.1 -0.1 -0.9 -0.2 +0.1
stress perchlorate 75 mM -0.7 -0.0 -0.5 +0.1 +0.1
carbon source Carbon source D-Mannitol 10 mM -0.2 +0.0 -0.6 -0.4 +0.2
carbon source D,L-Lactate (C) +0.0 -0.3 -0.7 +0.4 -0.1
pH Minimal media pH6 +0.2 +0.2 -0.9 +0.0 -0.1
pH Minimal media pH9 +0.5 -0.1 -0.8 -0.2 +0.1
nitrogen source D-Serine (N) +0.0 +0.0 -1.0 +0.4 -0.0
nitrogen source L-tyrosine (N) +0.3 +0.2 -0.9 -0.0 -0.0
anaerobic Nitrate reduction with yeast extract +0.2 +0.4 -0.5 -0.2 +0.1
stress Thallium(I) acetate 0.008 mg/ml -0.6 +0.2 +0.4 +0.1 +0.1
stress Chlorite 0.08 mM -0.6 +0.3 +0.5 +0.3 +0.1
stress methylglyoxal 0.016 vol% +0.0 +0.3 +0.6 +0.3 -0.4
carbon source L-Arabinose (C) +0.3 -0.2 +0.7 +0.1 +0.1
motility outer cut, LB soft agar motility assay -0.2 -0.0 +0.6 +0.6 +0.1
stress Lomefloxacin 0.0005 mM +0.9 +0.1 +0.3 -0.3 +0.4
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