Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_25350 and AO356_25355 are separated by 45 nucleotidesAO356_25355 and AO356_25360 overlap by 4 nucleotidesAO356_25360 and AO356_25365 overlap by 1 nucleotidesAO356_25365 and AO356_25370 overlap by 1 nucleotides AO356_25350: AO356_25350 - LysR family transcriptional regulator, at 5,734,886 to 5,735,800 _25350 AO356_25355: AO356_25355 - aspartate aminotransferase, at 5,735,846 to 5,737,060 _25355 AO356_25360: AO356_25360 - dimethylmenaquinone methyltransferase, at 5,737,057 to 5,737,695 _25360 AO356_25365: AO356_25365 - diguanylate cyclase, at 5,737,695 to 5,738,357 _25365 AO356_25370: AO356_25370 - diguanylate cyclase, at 5,738,357 to 5,739,022 _25370
Group Condition AO356_25350 AO356_25355 AO356_25360 AO356_25365 AO356_25370
stress copper (II) chloride 2.5 mM +0.1 -0.4 -3.1 +0.1 N.D.
anaerobic Nitrate reduction with yeast extract -0.2 -0.0 -0.9 -2.2 N.D.
stress Sisomicin 0.001 mg/ml -0.5 -0.1 -0.1 -0.9 N.D.
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 -0.3 -1.0 -0.2 N.D.
lb LB -0.1 +0.1 -0.9 -0.4 N.D.
motility outer cut, LB soft agar motility assay -0.2 +0.0 -0.9 -0.2 N.D.
carbon source L-Alanine (C) -0.4 -0.0 -0.9 +0.1 N.D.
stress nitrite 10 mM +0.2 -0.0 -0.6 -0.8 N.D.
stress methylglyoxal 0.016 vol% -0.1 -0.2 -1.2 +0.3 N.D.
stress Cisplatin 0.0032 mg/ml +0.2 +0.0 -1.0 -0.3 N.D.
stress Aluminum chloride 5 mM -0.1 +0.1 -0.1 -1.0 N.D.
carbon source L-Lysine (C) +0.0 +0.1 -0.8 -0.4 N.D.
stress syringaldehyde 5 mM +0.1 +0.0 -0.8 -0.3 N.D.
stress Benzalkonium Chloride 0.016 mg/ml +0.2 +0.3 -0.9 -0.4 N.D.
carbon source D-Trehalose (C) +0.2 +0.0 -0.9 -0.2 N.D.
pH Minimal media pH8 +0.4 +0.4 -0.8 -0.3 N.D.
motility outer cut, LB soft agar motility assay +0.1 +0.5 -0.8 +0.3 N.D.
stress Choline chloride 500 mM +0.4 -0.3 -0.2 +0.4 N.D.
carbon source D-Galactose (C) +0.2 -0.3 +0.6 -0.3 N.D.
carbon source pyruvate (C) +0.1 -0.1 +0.7 -0.4 N.D.
carbon source L-Lactate (C) -0.2 -0.3 +0.9 +0.2 N.D.
carbon source D-Fructose (C) +0.2 -0.2 +0.9 -0.3 N.D.
stress Cholin acetate 40 mM -0.3 +0.2 +0.7 +0.2 N.D.
carbon source Carbon source Sucrose 10 mM +0.2 +0.5 +0.3 -0.3 N.D.
carbon source Carbon source D-Mannitol 10 mM -0.1 +0.3 +0.9 -0.2 N.D.
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.6 -0.4 +0.4 +0.4 N.D.
carbon source Carbon source D-Glucose 10 mM +0.3 +0.3 +0.8 -0.3 N.D.
stress Nickel (II) chloride 0.625 mM +0.3 +0.2 +0.8 -0.2 N.D.
carbon source D-Lactate (C) +0.3 -0.1 +0.8 +0.1 N.D.
stress Lomefloxacin 0.0005 mM +0.3 -0.1 +0.7 +0.7 N.D.
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