Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_25215 and AO356_25220 overlap by 8 nucleotidesAO356_25220 and AO356_25225 are separated by 10 nucleotidesAO356_25225 and AO356_25230 are separated by 25 nucleotidesAO356_25230 and AO356_25235 are separated by 1152 nucleotides AO356_25215: AO356_25215 - nitrate reductase, at 5,708,501 to 5,709,256 _25215 AO356_25220: AO356_25220 - nitrate reductase, at 5,709,249 to 5,709,929 _25220 AO356_25225: AO356_25225 - peptidylprolyl isomerase, at 5,709,940 to 5,710,893 _25225 AO356_25230: AO356_25230 - cyclic pyranopterin phosphate synthase MoaA, at 5,710,919 to 5,711,911 _25230 AO356_25235: AO356_25235 - anaerobic ribonucleoside-triphosphate reductase, at 5,713,064 to 5,715,079 _25235
Group Condition AO356_25215 AO356_25220 AO356_25225 AO356_25230 AO356_25235
anaerobic Nitrate reduction with yeast extract -4.9 -4.5 -4.7 -1.2 -4.4
motility outer cut, LB soft agar motility assay -0.2 +0.8 -4.6 -0.7 +0.1
carbon source D-Sorbitol (C) -0.3 -0.1 -1.2 -0.3 -0.0
stress Benzalkonium Chloride 0.016 mg/ml -0.1 -0.1 -1.8 -0.0 +0.1
carbon source Carbon source D-Mannitol 2.5 mM -0.3 -0.1 -0.8 -0.3 -0.2
stress Fusidic 0.1 mg/ml -0.2 -0.4 -0.9 -0.1 +0.1
carbon source Carbon source Sucrose 2.5 mM -0.4 +0.2 -0.7 -0.6 -0.1
stress Nickel (II) chloride 0.625 mM -0.1 -0.8 -0.6 -0.0 +0.1
carbon source Carbon source Sucrose 10 mM -0.4 +0.2 -0.6 -0.6 -0.0
stress methylglyoxal 0.016 vol% +0.4 -0.4 -1.0 -0.1 -0.1
motility outer cut, LB soft agar motility assay -0.8 +0.2 -0.5 -0.1 -0.1
carbon source Fumarate (C) +0.0 -0.9 -0.5 +0.2 +0.0
stress copper (II) chloride 2.5 mM +0.3 +0.0 -1.1 -0.6 +0.2
carbon source Ethanol (C) -0.1 +0.2 -1.3 +0.1 +0.0
carbon source L-Arginine (C) -0.3 -0.5 -0.6 +0.3 +0.2
motility outer cut, LB soft agar motility assay +0.3 +0.6 -1.9 -0.0 +0.2
nitrogen source nitrite (N) -0.1 +0.1 -1.3 +0.3 +0.1
survival 4C survival; 1152 hrs +0.2 +0.5 -1.1 -0.1 -0.0
carbon source Carbon source D-Mannitol 2.5 mM +0.0 -0.7 +0.5 -0.3 -0.2
carbon source L-Lysine (C) -0.6 -0.5 -0.0 +0.5 +0.1
stress Cholin acetate 20 mM +0.6 -0.3 -1.0 +0.1 +0.1
nitrogen source Adenine (N) +0.3 +0.2 -1.0 +0.2 -0.0
pH Minimal media pH8 -0.6 +0.3 +0.6 -0.1 -0.1
motility outer cut, LB soft agar motility assay -0.6 +0.6 -0.6 +0.6 +0.1
stress 1-ethyl-3-methylimidazolium acetate 5 mM +0.0 -0.5 +0.9 +0.1 +0.3
lb LB -0.2 +0.2 +1.0 -0.2 +0.2
stress KB-half, Pseudo5 supernatant -0.8 +0.3 +0.9 +0.7 +0.1
stress Ceftazidime 0.2 mg/ml -0.1 +0.8 +0.2 +0.6 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.1 +0.2 +0.8 +1.0 +0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.8 +0.6 +0.6 +0.5 +0.2
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