Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2C3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 198 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO356_25180 and AO356_25185 are separated by 219 nucleotides
AO356_25185 and AO356_25190 overlap by 4 nucleotides
AO356_25190 and AO356_25195 are separated by 306 nucleotides
AO356_25195 and AO356_25200 overlap by 23 nucleotides
AO356_25180: AO356_25180 - DnrE protein, at 5,696,793 to 5,697,470
_25180
AO356_25185: AO356_25185 - hypothetical protein, at 5,697,690 to 5,698,337
_25185
AO356_25190: AO356_25190 - histidine kinase, at 5,698,334 to 5,700,133
_25190
AO356_25195: AO356_25195 - MFS transporter, at 5,700,440 to 5,701,744
_25195
AO356_25200: AO356_25200 - nitrate/nitrite transporter NarK, at 5,701,722 to 5,703,119
_25200
Group
Condition
AO356
_25180
AO356
_25185
AO356
_25190
AO356
_25195
AO356
_25200
anaerobic
Nitrate reduction with yeast extract
N.D.
-2.7
-3.8
-2.7
-3.0
lb
LB
N.D.
-0.5
-0.5
-0.2
+0.1
carbon source
NAG (C)
N.D.
-0.3
-0.2
-0.1
-0.5
stress
Benzalkonium Chloride 0.016 mg/ml
N.D.
-0.3
-0.4
-0.0
-0.3
motility
outer cut, LB soft agar motility assay
N.D.
-0.5
+0.1
-0.1
-0.5
carbon source
casaminos (C)
N.D.
-0.5
-0.1
+0.0
-0.3
stress
Cobalt chloride 0.08 mM
N.D.
-0.2
+0.0
-0.1
-0.5
lb
LB
N.D.
-0.5
+0.2
-0.4
-0.0
carbon source
L-Lysine (C)
N.D.
+0.3
-0.1
-0.4
-0.4
nitrogen source
Carnitine Hydrochloride (N)
N.D.
-0.4
-0.1
+0.2
-0.2
carbon source
Carbon source Sucrose 10 mM
N.D.
-0.3
+0.2
-0.2
-0.3
stress
1-ethyl-3-methylimidazolium chloride 200 mM
N.D.
-0.2
+0.2
-0.2
-0.2
stress
Chlorite 0.08 mM
N.D.
+0.1
+0.1
-0.2
-0.4
stress
Rifampicin 0.0024 mg/ml
N.D.
+0.2
-0.0
-0.1
-0.5
nitrogen source
Uridine (N)
N.D.
+0.2
+0.2
-0.4
-0.3
carbon source
L-Histidine (C)
N.D.
+0.1
+0.3
+0.1
-0.7
stress
methylglyoxal 0.016 vol%
N.D.
-0.1
-0.2
-0.3
+0.4
carbon source
Cytidine (C)
N.D.
-0.3
-0.0
+0.3
-0.2
phage
P5ss-5 phage 10-1 dilution SM calcl2
N.D.
+0.4
-0.0
-0.3
-0.2
stress
KB-half, Pseudo11 supernatant, 100 uM FeCl3
N.D.
-0.5
-0.5
+0.0
+1.1
stress
acetate 40 mM
N.D.
+0.1
+0.3
+0.1
-0.3
carbon source
L-Malic (C)
N.D.
-0.2
+0.1
-0.1
+0.5
carbon source
L-Malic (C)
N.D.
+0.3
+0.3
-0.1
-0.3
nitrogen source
Urea (N)
N.D.
+0.5
+0.1
-0.3
+0.0
nitrogen source
D-Serine (N)
N.D.
-0.3
+0.1
-0.1
+0.6
temperature
LB 37C
N.D.
+0.3
+0.3
-0.2
+0.3
carbon source
D-Trehalose (C)
N.D.
+0.2
+0.3
-0.2
+0.5
carbon source
L-Glutamic (C)
N.D.
+0.3
+0.3
+0.2
+0.2
survival
4C survival; 192 hrs
N.D.
+0.2
+0.3
+0.2
+0.4
stress
KB-half, Pseudo5 supernatant
N.D.
+0.0
-0.5
-0.2
+1.8
remove
AO356_25180
plot
remove
AO356_25185
plot
remove
AO356_25190
remove
AO356_25195
plot
remove
AO356_25200
plot