Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 198 experiments or choose conditions or try the comparative fitness browser

500 ntAO356_25180 and AO356_25185 are separated by 219 nucleotidesAO356_25185 and AO356_25190 overlap by 4 nucleotidesAO356_25190 and AO356_25195 are separated by 306 nucleotidesAO356_25195 and AO356_25200 overlap by 23 nucleotides AO356_25180: AO356_25180 - DnrE protein, at 5,696,793 to 5,697,470 _25180 AO356_25185: AO356_25185 - hypothetical protein, at 5,697,690 to 5,698,337 _25185 AO356_25190: AO356_25190 - histidine kinase, at 5,698,334 to 5,700,133 _25190 AO356_25195: AO356_25195 - MFS transporter, at 5,700,440 to 5,701,744 _25195 AO356_25200: AO356_25200 - nitrate/nitrite transporter NarK, at 5,701,722 to 5,703,119 _25200
Group Condition AO356_25180 AO356_25185 AO356_25190 AO356_25195 AO356_25200
anaerobic Nitrate reduction with yeast extract N.D. -2.7 -3.8 -2.7 -3.0
lb LB N.D. -0.5 -0.5 -0.2 +0.1
carbon source NAG (C) N.D. -0.3 -0.2 -0.1 -0.5
stress Benzalkonium Chloride 0.016 mg/ml N.D. -0.3 -0.4 -0.0 -0.3
motility outer cut, LB soft agar motility assay N.D. -0.5 +0.1 -0.1 -0.5
carbon source casaminos (C) N.D. -0.5 -0.1 +0.0 -0.3
stress Cobalt chloride 0.08 mM N.D. -0.2 +0.0 -0.1 -0.5
lb LB N.D. -0.5 +0.2 -0.4 -0.0
carbon source L-Lysine (C) N.D. +0.3 -0.1 -0.4 -0.4
nitrogen source Carnitine Hydrochloride (N) N.D. -0.4 -0.1 +0.2 -0.2
carbon source Carbon source Sucrose 10 mM N.D. -0.3 +0.2 -0.2 -0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM N.D. -0.2 +0.2 -0.2 -0.2
stress Chlorite 0.08 mM N.D. +0.1 +0.1 -0.2 -0.4
stress Rifampicin 0.0024 mg/ml N.D. +0.2 -0.0 -0.1 -0.5
nitrogen source Uridine (N) N.D. +0.2 +0.2 -0.4 -0.3
carbon source L-Histidine (C) N.D. +0.1 +0.3 +0.1 -0.7
stress methylglyoxal 0.016 vol% N.D. -0.1 -0.2 -0.3 +0.4
carbon source Cytidine (C) N.D. -0.3 -0.0 +0.3 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. +0.4 -0.0 -0.3 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. -0.5 -0.5 +0.0 +1.1
stress acetate 40 mM N.D. +0.1 +0.3 +0.1 -0.3
carbon source L-Malic (C) N.D. -0.2 +0.1 -0.1 +0.5
carbon source L-Malic (C) N.D. +0.3 +0.3 -0.1 -0.3
nitrogen source Urea (N) N.D. +0.5 +0.1 -0.3 +0.0
nitrogen source D-Serine (N) N.D. -0.3 +0.1 -0.1 +0.6
temperature LB 37C N.D. +0.3 +0.3 -0.2 +0.3
carbon source D-Trehalose (C) N.D. +0.2 +0.3 -0.2 +0.5
carbon source L-Glutamic (C) N.D. +0.3 +0.3 +0.2 +0.2
survival 4C survival; 192 hrs N.D. +0.2 +0.3 +0.2 +0.4
stress KB-half, Pseudo5 supernatant N.D. +0.0 -0.5 -0.2 +1.8
remove
AO356_25180
plot
remove
AO356_25185
plot
remove
AO356_25190
remove
AO356_25195
plot
remove
AO356_25200
plot