Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_25105 and AO356_25110 are separated by 4 nucleotidesAO356_25110 and AO356_25115 overlap by 4 nucleotidesAO356_25115 and AO356_25120 are separated by 129 nucleotidesAO356_25120 and AO356_25125 are separated by 93 nucleotides AO356_25105: AO356_25105 - nitric oxide reductase activation protein NorD, at 5,683,648 to 5,685,486 _25105 AO356_25110: AO356_25110 - protein DnrP, at 5,685,491 to 5,685,691 _25110 AO356_25115: AO356_25115 - transcription factor, at 5,685,688 to 5,686,371 _25115 AO356_25120: AO356_25120 - hypothetical protein, at 5,686,501 to 5,686,830 _25120 AO356_25125: AO356_25125 - short-chain dehydrogenase, at 5,686,924 to 5,688,114 _25125
Group Condition AO356_25105 AO356_25110 AO356_25115 AO356_25120 AO356_25125
anaerobic Nitrate reduction with yeast extract -1.9 -2.7 -3.4 -0.4 -2.5
stress nitrite 10 mM -0.8 -0.4 -0.6 -1.2 -0.9
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.2 -0.6 -0.0 -1.1 -0.0
carbon source Carbon source D-Glucose 10 mM -0.2 +0.2 -0.0 -0.8 -0.4
pH Minimal media pH8 -0.2 +0.4 -0.3 -1.1 +0.0
stress nitrate 200 mM +0.2 -0.7 +0.3 -0.3 -0.6
carbon source L-Isoleucine (C) -0.2 -0.7 -0.5 +0.5 -0.1
stress Rifampicin 0.0024 mg/ml +0.4 -0.6 -0.2 -0.5 +0.1
survival 4C survival; 24 hrs -0.4 +0.1 +0.2 +0.3 -0.8
stress methylglyoxal 0.016 vol% -0.4 -1.4 -0.1 +0.9 +0.4
stress D-Cycloserine 0.1 mg/ml +0.0 -0.8 +0.2 -0.3 +0.4
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 -1.5 +0.0 +0.5 +0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 +0.4 -0.4 -0.4 +0.3
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.3 +0.5 -0.1 -0.5 +0.3
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.1 -0.1 +0.0 +0.7 -0.7
stress Lomefloxacin 0.0005 mM -0.5 +1.0 +0.6 -1.4 +0.3
carbon source D-Glucosamine Hydrochloride (C) +0.3 +0.6 -0.5 +0.0 -0.4
nitrogen source L-tyrosine (N) -0.4 +0.3 -0.4 +0.5 -0.1
carbon source Carbon source Sucrose 2.5 mM +0.1 -0.6 -0.3 +0.4 +0.5
nitrogen source D-Serine (N) -0.1 +0.7 -0.4 +0.5 -0.6
temperature LB 10C +0.1 +0.5 -0.2 +0.4 -0.6
stress Cholin acetate 40 mM +0.3 +0.6 +0.0 -1.3 +0.5
carbon source Carbon source D-Mannitol 10 mM -0.3 +1.0 -0.0 +0.1 -0.3
carbon source L-Leucine (C) -0.1 +0.4 -0.3 +0.6 -0.2
carbon source Fumarate (C) -0.5 +0.9 +0.1 +0.4 -0.2
motility outer cut, LB soft agar motility assay +0.1 -0.5 -0.1 +0.9 +0.7
motility outer cut, LB soft agar motility assay -0.0 +1.0 +0.2 -0.6 +0.4
stress Thallium(I) acetate 0.008 mg/ml -0.3 +0.1 +0.2 +0.7 +0.4
motility outer cut, LB soft agar motility assay -0.5 +0.8 +0.2 +0.8 +0.3
motility outer cut, LB soft agar motility assay +0.5 +0.9 -0.2 +0.2 +0.6
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