Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_24960 and AO356_24965 are separated by 112 nucleotidesAO356_24965 and AO356_24970 are separated by 141 nucleotidesAO356_24970 and AO356_24975 are separated by 137 nucleotidesAO356_24975 and AO356_24980 are separated by 257 nucleotides AO356_24960: AO356_24960 - hydroxyproline-2-epimerase, at 5,654,494 to 5,655,426 _24960 AO356_24965: AO356_24965 - GntR family transcriptional regulator, at 5,655,539 to 5,656,210 _24965 AO356_24970: AO356_24970 - MFS transporter, at 5,656,352 to 5,657,518 _24970 AO356_24975: AO356_24975 - GntR family transcriptional regulator, at 5,657,656 to 5,659,047 _24975 AO356_24980: AO356_24980 - TonB-dependent receptor, at 5,659,305 to 5,661,446 _24980
Group Condition AO356_24960 AO356_24965 AO356_24970 AO356_24975 AO356_24980
nitrogen source D-Serine (N) -0.1 -4.3 -0.3 +0.2 -0.1
carbon source D-Trehalose (C) +0.1 -2.1 -0.0 +0.1 -0.1
resistance 20 mM putrescine -0.2 -1.0 -0.2 +0.0 +0.0
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.2 -1.3 -0.1 +0.1 -0.0
stress Tetracycline 0.0001 mg/ml -0.0 -1.3 -0.0 -0.0 +0.1
carbon source Glycerol (C) -0.1 -1.2 +0.2 +0.1 -0.1
nitrogen source Gly-Glu (N) +0.2 -1.0 -0.1 -0.2 -0.0
nitrogen source Inosine (N) +0.1 -0.8 -0.4 -0.1 +0.1
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.2 -0.9 -0.1 +0.2 -0.1
carbon source m-Inositol (C) -0.3 -0.7 +0.2 +0.1 -0.1
carbon source L-Arabinose (C) +0.6 -1.2 +0.1 -0.2 +0.2
carbon source D-Trehalose (C) +0.2 -0.9 +0.3 +0.1 +0.1
stress Benzalkonium Chloride 0.016 mg/ml +0.3 -0.8 -0.1 +0.2 +0.2
stress KB-half, Pseudo5 supernatant +0.4 -0.6 +0.2 -0.1 +0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.4 -0.7 +0.2 -0.2 +0.2
stress Nickel (II) chloride 0.625 mM +0.7 -0.5 -0.1 +0.1 -0.1
stress Lomefloxacin 0.0005 mM -0.4 +0.7 -0.0 -0.2 +0.2
stress methylglyoxal 0.016 vol% -0.2 +0.7 -0.2 +0.3 -0.2
carbon source D-Gluconic Acid (C) +0.2 +0.8 -0.2 -0.1 -0.1
motility outer cut, LB soft agar motility assay +0.4 +0.8 -0.1 -0.3 +0.1
carbon source L-Asparagine (C) +0.3 +0.8 +0.1 +0.0 -0.2
carbon source L-Histidine (C) +0.2 +1.1 -0.0 -0.1 -0.2
carbon source L-Histidine (C) +0.2 +1.0 +0.2 -0.2 -0.2
stress Paraquat dichloride 0.0625 mg/ml +0.5 +0.9 -0.1 -0.1 -0.0
nitrogen source L-Phenylalanine (N) -0.0 +1.2 -0.0 +0.1 +0.0
stress Chlorite 0.04 mM +0.3 +0.8 +0.2 -0.0 -0.1
carbon source D-Ribose (C) +0.5 +0.6 +0.2 +0.1 -0.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.5 +0.6 +0.1 +0.1 +0.4
stress Cholin acetate 20 mM +0.5 +1.1 +0.1 -0.0 +0.0
nitrogen source L-Leucine (N) -0.0 +2.6 -0.1 +0.3 -0.1
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