Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_24800 and AO356_24805 are separated by 509 nucleotidesAO356_24805 and AO356_24810 are separated by 214 nucleotidesAO356_24810 and AO356_24815 are separated by 196 nucleotidesAO356_24815 and AO356_24820 are separated by 340 nucleotides AO356_24800: AO356_24800 - type II secretion system protein GspF, at 5,607,933 to 5,609,144 _24800 AO356_24805: AO356_24805 - alkaline phosphatase, at 5,609,654 to 5,610,823 _24805 AO356_24810: AO356_24810 - hemagglutinin, at 5,611,038 to 5,623,655 _24810 AO356_24815: AO356_24815 - diguanylate cyclase, at 5,623,852 to 5,626,425 _24815 AO356_24820: AO356_24820 - calcium-binding protein, at 5,626,766 to 5,627,152 _24820
Group Condition AO356_24800 AO356_24805 AO356_24810 AO356_24815 AO356_24820
anaerobic Nitrate reduction with yeast extract -1.0 +0.1 +0.1 +0.3 -1.0
carbon source succinate (C) -0.2 -0.0 -0.0 +0.1 -1.2
nitrogen source L-Phenylalanine (N) -0.2 -0.1 +0.1 -0.2 -0.9
stress syringaldehyde 5 mM +0.0 -0.4 +0.0 -0.2 -0.6
motility outer cut, LB soft agar motility assay -0.3 -0.3 -0.0 +0.2 -0.7
carbon source D-Fructose (C) -0.0 -0.3 +0.0 +0.1 -0.8
stress Cobalt chloride 0.08 mM -0.2 +0.2 +0.0 -0.0 -0.8
stress copper (II) chloride 2.5 mM +0.2 -0.0 +0.1 +0.4 -1.6
carbon source D-Glucose (C) -0.3 +0.1 -0.0 +0.2 -0.8
stress Benzalkonium Chloride 0.016 mg/ml +0.3 +0.1 +0.1 +0.5 -1.7
stress Chlorite 0.08 mM +0.1 -0.0 +0.0 +0.2 -1.0
carbon source L-Leucine (C) +0.0 +0.3 +0.0 -0.1 -0.8
stress Lomefloxacin 0.0005 mM -0.6 -0.3 +0.2 -0.5 +0.7
stress Cobalt chloride 0.08 mM -0.3 +0.2 +0.0 +0.2 -0.4
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.2 -0.5 +0.0 +0.1 +0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +0.0 -0.5 -0.4 +0.4
stress Nickel (II) chloride 0.625 mM -0.0 +0.2 -0.1 +0.2 -0.6
motility outer cut, LB soft agar motility assay -0.2 -0.7 +0.2 +0.3 +0.2
carbon source a-Ketoglutaric (C) -0.1 +0.3 -0.0 +0.2 -0.5
stress Doxycycline hyclate 0.0001 mg/ml +0.1 +0.4 -0.0 +0.1 -0.7
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.4 -0.1 -0.1 -0.1 +0.5
carbon source Cytidine (C) -0.3 -0.3 +0.1 +0.4 +0.2
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.1 +0.2 -0.0 +0.4 -0.4
stress KB-half, Pseudo5 supernatant +0.4 +0.4 -0.4 -0.1 +0.0
nitrogen source Uridine (N) -0.4 +0.1 +0.0 +0.2 +0.5
lb LB +0.3 +0.7 +0.0 -0.2 -0.1
stress Cephalothin 2 mg/ml -0.1 +0.2 -0.1 +0.2 +0.6
motility outer cut, LB soft agar motility assay -0.3 +0.3 +0.1 +0.1 +0.6
pH Minimal media pH7 +0.4 +0.0 -0.1 +0.1 +0.6
carbon source Carbon source Sucrose 5 mM +0.3 +0.2 +0.1 +0.3 +0.5
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