Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_24720 and AO356_24725 are separated by 195 nucleotidesAO356_24725 and AO356_24730 are separated by 155 nucleotidesAO356_24730 and AO356_24735 are separated by 205 nucleotidesAO356_24735 and AO356_24740 overlap by 4 nucleotides AO356_24720: AO356_24720 - DNA-binding protein, at 5,593,410 to 5,594,843 _24720 AO356_24725: AO356_24725 - alkylhydroperoxidase, at 5,595,039 to 5,595,479 _24725 AO356_24730: AO356_24730 - hypothetical protein, at 5,595,635 to 5,595,961 _24730 AO356_24735: AO356_24735 - TonB-dependent outer membrane receptor, at 5,596,167 to 5,596,799 _24735 AO356_24740: AO356_24740 - RNA polymerase subunit sigma-24, at 5,596,796 to 5,597,341 _24740
Group Condition AO356_24720 AO356_24725 AO356_24730 AO356_24735 AO356_24740
motility outer cut, LB soft agar motility assay -0.2 -0.4 +0.8 -1.9 -2.0
stress Thallium(I) acetate 0.008 mg/ml -0.2 -0.9 -0.7 -0.1 -0.2
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.1 -0.9 +0.1 -0.1 -0.6
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.0 -0.9 +0.1 -0.5 -0.4
stress Nickel (II) chloride 0.625 mM +0.1 +0.1 -0.9 -0.3 -0.5
stress perchlorate 75 mM +0.3 -0.7 +0.3 -0.7 -0.7
carbon source Cytidine (C) -0.2 -1.4 +0.6 -0.1 -0.1
nitrogen source L-Phenylalanine (N) -0.3 -0.6 +0.6 -0.3 -0.4
stress D-Cycloserine 0.1 mg/ml +0.1 +0.2 +0.3 -0.7 -0.7
stress Cisplatin 0.0032 mg/ml -0.1 -0.3 -0.9 +0.3 +0.4
carbon source L-Leucine (C) -0.3 -0.4 +0.5 +0.2 -0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 -0.9 -0.0 -0.6 +1.0
motility outer cut, LB soft agar motility assay -0.1 +0.1 +0.0 +0.7 -0.9
motility outer cut, LB soft agar motility assay -0.2 -0.3 -0.4 -0.1 +0.9
nitrogen source L-Isoleucine (N) +0.1 -0.5 +0.2 -0.4 +0.5
survival 4C survival; 360 hrs +0.1 -0.2 +0.7 -0.7 +0.1
carbon source D,L-Lactate (C) +0.1 -0.7 -0.3 +0.4 +0.7
stress Cisplatin 0.0032 mg/ml -0.1 +0.4 -0.4 -0.2 +0.7
carbon source L-Arginine (C) +0.1 -0.5 +0.5 -0.5 +0.8
nitrogen source L-tyrosine (N) -0.1 -0.4 +0.1 -0.1 +1.0
carbon source acetate (C) +0.0 -0.5 -0.1 +0.3 +0.8
carbon source Carbon source D,L-Lactate 10 mM +0.1 +0.1 +0.9 +0.0 -0.5
stress Benzalkonium Chloride 0.008 mg/ml -0.2 +0.6 -0.2 -0.4 +1.0
stress Nalidixic 0.004 mg/ml +0.4 +0.1 +0.7 -0.2 -0.2
stress KB-half, Pseudo5 supernatant +0.4 -1.0 +0.5 +0.6 +0.3
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.1 +0.5 +0.3 +0.7 -0.6
stress Sisomicin 0.001 mg/ml -0.1 +0.7 -0.3 -0.2 +1.0
stress Cephalothin 2 mg/ml -0.1 +0.6 +0.1 +0.6 +0.3
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.2 +0.2 +0.6 +0.7 +0.1
anaerobic Nitrate reduction with yeast extract +0.8 +1.3 +0.7 +0.5 +0.4
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