Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_24685 and AO356_24690 overlap by 8 nucleotidesAO356_24690 and AO356_24695 are separated by 154 nucleotidesAO356_24695 and AO356_24700 are separated by 316 nucleotidesAO356_24700 and AO356_24705 are separated by 429 nucleotides AO356_24685: AO356_24685 - 2-dehydro-3-deoxygluconokinase, at 5,583,209 to 5,584,189 _24685 AO356_24690: AO356_24690 - AP endonuclease, at 5,584,182 to 5,584,964 _24690 AO356_24695: AO356_24695 - transcriptional regulator, at 5,585,119 to 5,586,105 _24695 AO356_24700: AO356_24700 - hypothetical protein, at 5,586,422 to 5,586,775 _24700 AO356_24705: AO356_24705 - NAD-glutamate dehydrogenase, at 5,587,205 to 5,592,073 _24705
Group Condition AO356_24685 AO356_24690 AO356_24695 AO356_24700 AO356_24705
carbon source L-Arginine (C) -0.3 +0.1 +0.0 N.D. -4.3
carbon source L-Arginine (C) -0.2 +0.1 +0.1 N.D. -3.7
carbon source L-Lysine (C) -0.1 -0.5 -0.5 N.D. -1.5
carbon source L-Leucine (C) -0.2 +0.1 -0.2 N.D. -1.6
carbon source L-Lysine (C) -0.3 +0.0 -0.2 N.D. -1.3
carbon source L-Histidine (C) -0.3 -0.3 -0.1 N.D. -1.0
anaerobic Nitrate reduction with yeast extract -0.9 +0.4 -0.7 N.D. -0.3
carbon source Inosine (C) -0.4 -0.2 -1.0 N.D. -0.0
carbon source L-Proline (C) -0.1 -0.3 -0.5 N.D. -0.6
carbon source L-Histidine (C) -0.1 +0.1 -0.3 N.D. -1.2
motility outer cut, LB soft agar motility assay +0.4 -0.3 -1.0 N.D. -0.4
motility outer cut, LB soft agar motility assay -0.2 +0.2 -1.0 N.D. -0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.8 +0.4 -1.0 N.D. +0.1
stress copper (II) chloride 2.5 mM -0.6 +0.4 -0.5 N.D. -0.4
stress Chlorite 0.04 mM +0.2 -0.1 -1.2 N.D. +0.3
motility outer cut, LB soft agar motility assay +0.4 -0.4 -0.5 N.D. -0.3
stress Nickel (II) chloride 0.625 mM +0.3 -0.1 -0.0 N.D. -0.9
stress Cholin acetate 40 mM +0.0 -0.3 +0.7 N.D. -1.1
carbon source Carbon source D,L-Lactate 10 mM -0.1 +0.2 -1.0 N.D. +0.3
stress Nickel (II) chloride 0.625 mM +0.4 +0.2 -0.4 N.D. -0.5
carbon source m-Inositol (C) -0.3 +0.3 -0.6 N.D. +0.4
carbon source Carbon source Sucrose 2.5 mM +0.1 +0.3 -0.8 N.D. +0.5
survival 4C survival; 1152 hrs +0.2 -0.4 +0.8 N.D. -0.4
motility outer cut, LB soft agar motility assay +0.9 -0.3 +0.0 N.D. -0.4
carbon source D-Trehalose (C) -0.3 -0.2 +1.0 N.D. -0.1
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.1 +0.2 -0.5 N.D. +0.6
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.1 +0.1 -0.7 N.D. +1.0
carbon source Carbon source D-Mannitol 2.5 mM +0.2 +0.1 -0.4 N.D. +0.7
carbon source Carbon source Sucrose 10 mM -0.3 +0.6 -0.1 N.D. +0.7
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.4 +0.4 -0.3 N.D. +0.8
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