Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_24590 and AO356_24595 are separated by 149 nucleotidesAO356_24595 and AO356_24600 are separated by 12 nucleotidesAO356_24600 and AO356_24605 are separated by 237 nucleotidesAO356_24605 and AO356_24610 overlap by 14 nucleotides AO356_24590: AO356_24590 - MFS transporter, at 5,559,955 to 5,561,277 _24590 AO356_24595: AO356_24595 - 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43) (from data), at 5,561,427 to 5,562,419 _24595 AO356_24600: AO356_24600 - ketoglutarate semialdehyde dehydrogenase, at 5,562,432 to 5,564,012 _24600 AO356_24605: AO356_24605 - hypothetical protein, at 5,564,250 to 5,564,546 _24605 AO356_24610: AO356_24610 - 3-carboxymuconate cyclase, at 5,564,533 to 5,565,708 _24610
Group Condition AO356_24590 AO356_24595 AO356_24600 AO356_24605 AO356_24610
carbon source L-Arabinose (C) -2.9 -4.7 -1.9 N.D. -0.1
carbon source L-Arabinose (C) -3.1 -4.4 -1.7 N.D. -0.0
motility outer cut, LB soft agar motility assay -0.3 +0.2 -1.5 N.D. +0.1
stress Chlorite 0.04 mM +0.1 -0.2 -1.5 N.D. +0.0
carbon source Carbon source D-Glucose 10 mM -0.1 -0.2 -0.2 N.D. -0.7
stress Chlorite 0.08 mM -0.2 -0.2 -0.3 N.D. -0.5
carbon source Carbon source D-Glucose 10 mM -0.1 -0.5 +0.1 N.D. -0.6
motility outer cut, LB soft agar motility assay -0.0 -0.7 -0.4 N.D. -0.0
nitrogen source Urea (N) -0.0 -0.3 -0.6 N.D. -0.2
nitrogen source Adenosine (N) -0.2 -0.3 -0.4 N.D. -0.3
stress Sisomicin 0.001 mg/ml -0.1 -0.3 -0.7 N.D. +0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 -0.3 -1.1 N.D. +0.2
motility outer cut, LB soft agar motility assay -0.2 +0.3 -1.1 N.D. -0.1
carbon source D-Mannose (C) +0.0 -0.7 -0.4 N.D. +0.0
nitrogen source Ammonium chloride (N) -0.2 -0.3 -0.5 N.D. +0.1
carbon source Carbon source Sucrose 2.5 mM +0.2 -0.3 -0.3 N.D. -0.4
carbon source D-Xylose (C) -0.1 +0.1 -0.8 N.D. +0.1
nitrogen source nitrite (N) +0.2 +0.1 -0.5 N.D. -0.3
motility outer cut, LB soft agar motility assay +0.5 -0.0 -0.6 N.D. -0.2
stress copper (II) chloride 2.5 mM -0.1 -0.6 -0.1 N.D. +0.5
stress perchlorate 75 mM +0.2 +0.3 -0.2 N.D. -0.4
carbon source L-Leucine (C) +0.1 -0.3 +0.5 N.D. -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.6 +0.8 -0.3 N.D. +0.2
stress nitrate 200 mM +0.2 +0.6 -0.3 N.D. -0.4
stress Cephalothin 2 mg/ml +0.1 +0.4 -0.4 N.D. +0.2
pH Minimal media pH6 +0.4 +0.6 -0.3 N.D. -0.4
pH Minimal media pH6 +0.5 +0.6 -0.1 N.D. -0.6
carbon source D-Galactose (C) +0.7 +0.5 +0.1 N.D. -0.5
carbon source D-Galactose (C) +0.8 +0.8 -0.0 N.D. -0.4
stress KB-half, Pseudo5 supernatant -0.4 +0.0 +0.9 N.D. +0.6
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