Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_24540 and AO356_24545 overlap by 4 nucleotidesAO356_24545 and AO356_24550 are separated by 45 nucleotidesAO356_24550 and AO356_24555 overlap by 4 nucleotidesAO356_24555 and AO356_24560 are separated by 13 nucleotides AO356_24540: AO356_24540 - serine/threonine protein phosphatase, at 5,542,461 to 5,543,432 _24540 AO356_24545: AO356_24545 - peptidase S54, at 5,543,429 to 5,544,301 _24545 AO356_24550: AO356_24550 - hypothetical protein, at 5,544,347 to 5,544,607 _24550 AO356_24555: AO356_24555 - hypothetical protein, at 5,544,604 to 5,545,434 _24555 AO356_24560: AO356_24560 - aminopeptidase, at 5,545,448 to 5,548,105 _24560
Group Condition AO356_24540 AO356_24545 AO356_24550 AO356_24555 AO356_24560
carbon source acetate (C) -2.3 -0.6 -1.9 +0.2 +0.1
carbon source succinate (C) -0.6 +0.2 -3.8 +0.3 +0.1
carbon source acetate (C) -1.9 -0.3 -1.8 +0.3 +0.0
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.3 -0.0 +0.1 -2.9 -0.2
carbon source succinate (C) -0.0 -0.2 -2.3 -0.6 +0.0
motility outer cut, LB soft agar motility assay +0.3 +0.3 -2.7 -0.7 -0.0
motility outer cut, LB soft agar motility assay +0.7 +0.2 -2.2 -1.5 -0.1
carbon source L-Histidine (C) -1.0 -0.3 -1.5 -0.1 +0.0
stress copper (II) chloride 2.5 mM -0.6 -0.5 -2.8 +1.3 -0.2
carbon source L-Leucine (C) -1.4 -0.5 -0.6 -0.1 -0.1
carbon source a-Ketoglutaric (C) -0.5 -0.0 -0.9 -1.5 +0.1
stress Chlorite 0.08 mM -0.6 -0.5 -1.1 -0.7 +0.2
carbon source D-Alanine (C) -0.4 +0.2 -1.1 -1.2 +0.0
carbon source a-Ketoglutaric (C) -0.2 -0.0 -1.0 -1.3 +0.0
stress Sisomicin 0.001 mg/ml -0.2 -3.4 +1.8 -0.3 -0.2
anaerobic Nitrate reduction with yeast extract -0.5 -1.3 +0.1 -0.4 -0.1
nitrogen source L-Leucine (N) -1.4 +0.1 +0.3 -0.8 -0.2
stress nitrite 10 mM -0.3 -0.4 -2.1 +0.7 +0.1
stress Cobalt chloride 0.08 mM -0.4 +0.2 -1.8 +0.5 -0.1
carbon source L-Lysine (C) -1.0 -1.2 +1.2 -0.2 -0.4
temperature LB 20C -0.0 -0.3 -1.5 +0.6 +0.0
nitrogen source Cytosine (N) -0.2 -0.5 -1.2 +0.9 -0.1
pH Minimal media pH9 -0.1 -0.5 -0.9 +0.9 -0.3
carbon source L-Lysine (C) -1.1 +0.4 +0.7 -0.3 -0.3
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.8 -0.1 +1.2 -0.5 -0.0
stress Cisplatin 0.0032 mg/ml -0.5 +0.1 -0.8 +1.1 +0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 -0.7 +0.5 +1.4 -0.1
survival 4C survival; 1152 hrs +0.7 -0.5 -0.3 +1.2 +0.0
resistance 20 mM putrescine -0.5 -0.1 +0.7 +1.2 -0.1
stress methylglyoxal 0.016 vol% -0.7 +0.7 +1.0 +0.9 +0.1
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