Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_24405 and AO356_24410 are separated by 123 nucleotidesAO356_24410 and AO356_24415 are separated by 182 nucleotidesAO356_24415 and AO356_24420 are separated by 23 nucleotidesAO356_24420 and AO356_24425 are separated by 146 nucleotides AO356_24405: AO356_24405 - tRNA hydroxylase, at 5,512,165 to 5,512,770 _24405 AO356_24410: AO356_24410 - alanine acetyltransferase, at 5,512,894 to 5,513,382 _24410 AO356_24415: AO356_24415 - DNA-3-methyladenine glycosylase, at 5,513,565 to 5,514,182 _24415 AO356_24420: AO356_24420 - XRE family transcriptional regulator, at 5,514,206 to 5,515,288 _24420 AO356_24425: AO356_24425 - hypothetical protein, at 5,515,435 to 5,515,923 _24425
Group Condition AO356_24405 AO356_24410 AO356_24415 AO356_24420 AO356_24425
anaerobic Nitrate reduction with yeast extract -1.7 -0.8 +0.5 -0.5 N.D.
motility outer cut, LB soft agar motility assay -1.4 +0.0 -0.8 -0.2 N.D.
temperature LB 30C -0.3 -0.5 -0.4 -0.3 N.D.
temperature LB 10C -0.3 -0.6 +0.0 -0.4 N.D.
stress Chlorite 0.08 mM -0.9 +0.0 -0.1 -0.3 N.D.
stress Chlorite 0.04 mM -0.0 -0.3 +0.2 -1.1 N.D.
carbon source D-Trehalose (C) -0.6 -0.3 -0.4 +0.2 N.D.
carbon source L-Lysine (C) -0.2 -0.9 -0.2 +0.1 N.D.
stress Sisomicin 0.001 mg/ml +0.4 -1.1 -0.1 +0.1 N.D.
stress methylglyoxal 0.016 vol% +0.4 -0.5 +0.1 -0.6 N.D.
stress copper (II) chloride 2.5 mM -0.2 +1.2 -0.7 -0.8 N.D.
stress Cholin acetate 40 mM +0.7 -0.3 -0.5 -0.2 N.D.
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.0 +0.6 -0.9 -0.0 N.D.
stress Lomefloxacin 0.0005 mM +0.5 -1.2 +0.2 +0.6 N.D.
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.6 -1.0 +0.2 +0.3 N.D.
stress Ceftazidime 0.2 mg/ml +0.4 -0.4 -0.1 +0.4 N.D.
stress Benzalkonium Chloride 0.016 mg/ml +0.7 -0.6 -0.1 +0.3 N.D.
survival 4C survival; 360 hrs +0.5 -0.5 +0.3 +0.1 N.D.
motility outer cut, LB soft agar motility assay +0.4 +0.7 -1.1 +0.4 N.D.
carbon source Carbon source D,L-Lactate 10 mM +0.5 +0.3 +0.2 -0.4 N.D.
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.6 +0.4 -0.2 -0.2 N.D.
carbon source D-Mannose (C) -0.1 +0.8 +0.3 -0.4 N.D.
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.5 +0.5 -0.2 -0.1 N.D.
nitrogen source D-Alanine (N) +0.1 +0.6 +0.4 -0.3 N.D.
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.6 -0.2 +0.2 +0.4 N.D.
stress nitrite 10 mM -0.4 +1.0 +0.6 -0.2 N.D.
stress nitrate 200 mM +0.2 -0.2 +0.7 +0.4 N.D.
stress Cholin acetate 20 mM +0.5 +0.3 +0.7 -0.3 N.D.
carbon source Cytidine (C) +0.3 +1.2 -0.1 -0.0 N.D.
carbon source Inosine (C) +0.2 +0.6 +0.4 +0.1 N.D.
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