Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_24205 and AO356_24210 are separated by 158 nucleotidesAO356_24210 and AO356_24215 are separated by 3 nucleotidesAO356_24215 and AO356_24220 are separated by 355 nucleotidesAO356_24220 and AO356_24225 are separated by 8 nucleotides AO356_24205: AO356_24205 - Alpha,alpha-trehalase (EC 3.2.1.28) (from data), at 5,428,153 to 5,429,778 _24205 AO356_24210: AO356_24210 - diguanylate cyclase, at 5,429,937 to 5,430,890 _24210 AO356_24215: AO356_24215 - chemotaxis protein CheC, at 5,430,894 to 5,431,904 _24215 AO356_24220: AO356_24220 - diguanylate cyclase, at 5,432,260 to 5,434,632 _24220 AO356_24225: AO356_24225 - phosphate ABC transporter substrate-binding protein, at 5,434,641 to 5,435,078 _24225
Group Condition AO356_24205 AO356_24210 AO356_24215 AO356_24220 AO356_24225
carbon source D-Trehalose (C) -4.9 +1.0 +0.4 +0.4 +0.3
carbon source D-Trehalose (C) -4.7 +1.0 +0.4 +0.4 +0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.2 -0.0 -1.4 -0.3 +0.3
anaerobic Nitrate reduction with yeast extract +0.2 -1.0 -0.1 -0.1 -0.0
stress copper (II) chloride 2.5 mM +0.1 -0.1 -0.9 -0.0 -0.2
stress Chlorite 0.08 mM -0.2 -0.0 -0.1 -0.3 -0.5
stress KB-half, Pseudo5 supernatant +0.0 -0.1 -1.0 -0.3 +0.3
stress Choline chloride 300 mM -0.1 -0.1 -0.5 +0.0 -0.2
stress Lomefloxacin 0.0005 mM -0.1 +0.0 -0.9 +0.1 +0.1
nitrogen source Gly-Glu (N) +0.1 +0.0 -0.4 -0.2 -0.2
stress syringaldehyde 5 mM +0.0 +0.3 -0.8 +0.1 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.2 -0.2 -0.1 -0.5 +0.4
motility outer cut, LB soft agar motility assay -0.0 -0.1 +0.2 +0.1 -0.6
carbon source a-Ketoglutaric (C) +0.1 -0.0 -0.5 -0.2 +0.2
carbon source acetate (C) -0.1 +0.2 +0.1 -0.1 -0.4
carbon source L-Lysine (C) +0.1 +0.3 -0.0 +0.2 -0.6
carbon source L-Lactate (C) -0.1 -0.1 +0.5 +0.0 -0.3
carbon source Cytidine (C) +0.0 -0.2 +0.4 -0.2 +0.2
stress Cholin acetate 20 mM -0.0 +0.2 -0.6 +0.1 +0.5
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.1 +0.1 -0.4 +0.2 +0.4
carbon source L-Arginine (C) +0.1 -0.0 +0.2 +0.3 -0.4
nitrogen source L-Leucine (N) +0.0 +0.2 +0.4 -0.2 -0.2
carbon source Carbon source D-Mannitol 2.5 mM -0.1 -0.2 +0.3 -0.1 +0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 +0.2 -0.5 +0.2 +0.4
stress Thallium(I) acetate 0.008 mg/ml -0.0 +0.3 +0.4 -0.0 -0.2
survival 4C survival; 672 hrs -0.0 +0.1 +0.5 -0.2 +0.2
motility outer cut, LB soft agar motility assay -0.0 +0.5 +0.2 -0.1 +0.2
carbon source Carbon source D-Glucose 10 mM -0.1 -0.0 +0.5 +0.2 +0.4
carbon source Carbon source Sucrose 10 mM +0.0 -0.0 +0.6 +0.2 +0.1
motility outer cut, LB soft agar motility assay -0.0 +0.6 +0.5 +0.3 +0.2
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