Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_24000 and AO356_24005 overlap by 4 nucleotidesAO356_24005 and AO356_24010 overlap by 4 nucleotidesAO356_24010 and AO356_24015 overlap by 11 nucleotidesAO356_24015 and AO356_24020 overlap by 14 nucleotides AO356_24000: AO356_24000 - hydroxyacid dehydrogenase, at 5,380,607 to 5,382,031 _24000 AO356_24005: AO356_24005 - aspartate aminotransferase, at 5,382,028 to 5,383,239 _24005 AO356_24010: AO356_24010 - amino acid ABC transporter, at 5,383,236 to 5,383,970 _24010 AO356_24015: AO356_24015 - amino acid ABC transporter, at 5,383,960 to 5,384,748 _24015 AO356_24020: AO356_24020 - phosphate ABC transporter ATP-binding protein, at 5,384,735 to 5,385,571 _24020
Group Condition AO356_24000 AO356_24005 AO356_24010 AO356_24015 AO356_24020
motility outer cut, LB soft agar motility assay -0.5 -0.4 -0.9 +0.5 -0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.3 -0.5 -0.6 +0.1 -0.5
nitrogen source D-Serine (N) +0.0 -0.4 -0.5 -0.4 +0.2
stress nitrate 200 mM -0.1 +0.1 -0.4 +0.1 -0.7
carbon source L-Lysine (C) +0.0 +0.1 -0.7 -0.3 -0.1
stress Vanillin 1.25 mM -0.2 -0.4 -0.2 +0.1 -0.3
anaerobic Nitrate reduction with yeast extract -0.6 -0.8 -0.2 -0.2 +1.1
carbon source Putrescine (C) +0.2 -0.7 -0.2 -0.2 +0.3
carbon source D,L-Lactate (C) +0.3 -0.3 -0.1 +0.1 -0.5
stress Nickel (II) chloride 0.625 mM +0.2 -0.3 +0.3 -0.0 -0.5
stress Cisplatin 0.0032 mg/ml +0.4 -0.0 +0.2 +0.1 -0.9
stress perchlorate 75 mM -0.3 +0.2 +0.4 +0.0 -0.5
survival 4C survival; 360 hrs -0.1 +0.4 -0.4 +0.2 -0.3
stress Cobalt chloride 0.08 mM +0.2 -0.4 +0.4 -0.2 -0.2
carbon source D-Trehalose (C) +0.2 -0.2 -0.6 +0.1 +0.3
carbon source L-Histidine (C) +0.2 -0.3 -0.3 -0.1 +0.5
carbon source L-Malic (C) +0.2 -0.4 -0.3 +0.1 +0.3
stress copper (II) chloride 2.5 mM -0.1 +0.8 -0.4 +0.3 -0.7
stress Choline chloride 500 mM -0.2 -0.4 +0.4 +0.1 +0.2
stress Paraquat dichloride 0.0625 mg/ml +0.1 +0.2 +0.1 +0.3 -0.6
carbon source D-Mannose (C) -0.1 +0.4 -0.5 +0.1 +0.3
carbon source a-Ketoglutaric (C) +0.3 +0.1 +0.3 +0.2 -0.7
stress Thallium(I) acetate 0.008 mg/ml -0.3 +0.9 +0.1 -0.0 -0.4
carbon source L-Arabinose (C) +0.1 +0.2 +0.4 +0.0 -0.4
carbon source Glycerol (C) +0.2 -0.4 +0.6 +0.1 +0.1
stress Cisplatin 0.0032 mg/ml -0.2 +0.7 +0.2 +0.1 -0.1
motility outer cut, LB soft agar motility assay +0.5 +0.2 -0.3 +0.2 +0.8
motility outer cut, LB soft agar motility assay +0.5 +0.6 +0.6 +0.3 -0.6
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.4 +0.4 +0.3 +0.5 +0.1
stress KB-half, Pseudo5 supernatant +0.8 +0.2 +0.5 +0.2 +0.0
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