Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_23985 and AO356_23990 are separated by 242 nucleotidesAO356_23990 and AO356_23995 are separated by 55 nucleotidesAO356_23995 and AO356_24000 overlap by 4 nucleotidesAO356_24000 and AO356_24005 overlap by 4 nucleotides AO356_23985: AO356_23985 - LysR family transcriptional regulator, at 5,377,761 to 5,378,618 _23985 AO356_23990: AO356_23990 - amino acid ABC transporter, at 5,378,861 to 5,379,703 _23990 AO356_23995: AO356_23995 - amino acid ABC transporter, at 5,379,759 to 5,380,610 _23995 AO356_24000: AO356_24000 - hydroxyacid dehydrogenase, at 5,380,607 to 5,382,031 _24000 AO356_24005: AO356_24005 - aspartate aminotransferase, at 5,382,028 to 5,383,239 _24005
Group Condition AO356_23985 AO356_23990 AO356_23995 AO356_24000 AO356_24005
stress nitrate 200 mM +0.2 -3.5 +0.3 -0.1 +0.1
motility outer cut, LB soft agar motility assay -0.4 -1.7 +0.4 -0.5 -0.4
anaerobic Nitrate reduction with yeast extract -0.1 -0.2 -0.4 -0.6 -0.8
carbon source Carbon source D-Mannitol 10 mM -0.2 -1.4 +0.0 +0.0 -0.4
carbon source succinate (C) +0.1 -1.3 -0.6 +0.1 -0.0
stress perchlorate 75 mM -0.1 -1.5 +0.1 -0.3 +0.2
stress Chlorite 0.04 mM +0.1 -0.8 -0.7 -0.1 -0.0
stress Aluminum chloride 5 mM -0.2 -1.7 +0.1 +0.2 +0.0
carbon source succinate (C) -0.1 -1.3 -0.2 +0.1 +0.2
carbon source D-Lactate (C) -0.1 -1.1 -0.5 +0.1 +0.3
carbon source D,L-Lactate (C) -0.1 -0.4 -0.5 +0.3 -0.3
carbon source D-Xylose (C) +0.1 -0.7 -0.7 +0.2 +0.0
carbon source Putrescine (C) +0.5 -0.8 -0.0 +0.2 -0.7
nitrogen source D-Serine (N) +0.3 -0.8 +0.2 +0.0 -0.4
temperature LB 10C +0.4 -1.0 +0.2 -0.1 +0.0
stress Cholin acetate 20 mM -0.1 -0.9 +0.2 +0.2 +0.4
stress Thallium(I) acetate 0.008 mg/ml +0.1 -0.6 -0.2 -0.3 +0.9
temperature LB 30C -0.2 +0.8 -0.4 +0.2 -0.3
stress copper (II) chloride 2.5 mM +0.4 -1.1 +0.1 -0.1 +0.8
stress Cisplatin 0.0032 mg/ml +0.3 -0.5 -0.2 -0.2 +0.7
carbon source L-Malic (C) +0.3 +0.6 -0.2 +0.2 -0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 +1.0 +0.2 +0.1 -0.5
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 -0.4 +0.7 +0.4 +0.4
motility outer cut, LB soft agar motility assay -0.7 +0.7 +0.1 +0.5 +0.6
motility outer cut, LB soft agar motility assay -0.3 +1.0 -0.1 +0.5 +0.2
carbon source L-Arginine (C) +0.2 +0.9 -0.2 +0.5 -0.0
carbon source D-Mannose (C) +0.3 +0.6 +0.2 -0.1 +0.4
survival 4C survival; 1152 hrs -0.1 +1.2 -0.1 +0.3 +0.2
survival 4C survival; 360 hrs +0.2 +0.6 +0.4 -0.1 +0.4
stress KB-half, Pseudo5 supernatant -0.3 -0.2 +1.2 +0.8 +0.2
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