Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_23800 and AO356_23805 are separated by 63 nucleotidesAO356_23805 and AO356_23810 are separated by 74 nucleotidesAO356_23810 and AO356_23815 are separated by 183 nucleotidesAO356_23815 and AO356_23820 are separated by 245 nucleotides AO356_23800: AO356_23800 - AraC family transcriptional regulator, at 5,338,382 to 5,339,263 _23800 AO356_23805: AO356_23805 - hypothetical protein, at 5,339,327 to 5,340,268 _23805 AO356_23810: AO356_23810 - LysR family transcriptional regulator, at 5,340,343 to 5,341,197 _23810 AO356_23815: AO356_23815 - amidase, at 5,341,381 to 5,343,087 _23815 AO356_23820: AO356_23820 - thermostable hemolysin, at 5,343,333 to 5,344,010 _23820
Group Condition AO356_23800 AO356_23805 AO356_23810 AO356_23815 AO356_23820
stress Lomefloxacin 0.0005 mM +0.1 -0.1 +0.2 -2.5 -0.3
carbon source L-Arginine (C) -0.1 -0.4 +0.0 -1.8 +0.2
carbon source L-Arginine (C) -0.0 -0.2 -0.1 -1.4 -0.3
carbon source L-Lysine (C) -0.1 -0.5 +0.0 -0.6 -0.6
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.0 -0.9 -0.2 -0.3 -0.3
stress Doxycycline hyclate 0.0001 mg/ml +0.1 +0.0 -0.2 -1.4 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 +0.1 -0.6 -0.4 -0.2
nitrogen source L-Phenylalanine (N) -0.2 -0.3 -0.3 -0.4 -0.4
carbon source L-Lysine (C) -0.0 +0.0 +0.1 -1.6 +0.1
nitrogen source L-Leucine (N) -0.2 -0.2 -0.3 -0.6 -0.1
survival 4C survival; 360 hrs -0.2 -0.9 +0.3 -0.8 +0.3
stress Tetracycline 0.0001 mg/ml +0.0 -0.2 -0.2 -0.9 -0.1
stress Aluminum chloride 5 mM +0.2 +0.0 -0.3 -0.8 -0.4
carbon source Carbon source D-Mannitol 2.5 mM +0.1 -0.5 -0.2 -0.6 -0.1
anaerobic Nitrate reduction with yeast extract -0.4 -1.5 +0.1 +0.5 +0.1
carbon source NAG (C) +0.3 -0.2 -0.0 -0.8 -0.2
stress copper (II) chloride 2.5 mM +0.1 -0.5 +0.2 +0.4 -0.8
stress KB-half, Pseudo5 supernatant +0.1 +0.6 -0.4 -0.6 -0.1
motility outer cut, LB soft agar motility assay +0.6 -0.8 +0.1 +0.2 -0.2
motility outer cut, LB soft agar motility assay +0.1 -0.8 +0.2 +0.8 -0.2
stress perchlorate 75 mM +0.0 -0.4 -0.3 +1.2 -0.3
stress nitrite 10 mM +0.3 +0.4 -0.1 -0.5 +0.1
stress Sisomicin 0.001 mg/ml +0.3 -0.3 -0.3 +0.3 +0.2
stress Cholin acetate 40 mM -0.2 -0.7 +0.2 +1.1 -0.1
motility outer cut, LB soft agar motility assay +0.4 -0.6 +0.2 +0.1 +0.3
stress Benzalkonium Chloride 0.016 mg/ml -0.1 -0.0 -0.3 +1.0 -0.0
carbon source D-Ribose (C) -0.4 +0.4 -0.0 +0.2 +0.4
motility outer cut, LB soft agar motility assay -0.1 +0.4 +0.0 +1.0 -0.1
stress Cobalt chloride 0.08 mM +0.0 +0.4 +0.0 +0.9 +0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.0 +0.3 -0.3 +1.6 +0.0
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