Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_23560 and AO356_23565 are separated by 102 nucleotidesAO356_23565 and AO356_23570 overlap by 20 nucleotidesAO356_23570 and AO356_23575 are separated by 2 nucleotidesAO356_23575 and AO356_23580 are separated by 444 nucleotides AO356_23560: AO356_23560 - hypothetical protein, at 5,281,149 to 5,283,518 _23560 AO356_23565: AO356_23565 - peptidase, at 5,283,621 to 5,285,405 _23565 AO356_23570: AO356_23570 - hemolysin secretion protein D, at 5,285,386 to 5,286,699 _23570 AO356_23575: AO356_23575 - channel protein TolC, at 5,286,702 to 5,288,075 _23575 AO356_23580: AO356_23580 - LuxR family transcriptional regulator, at 5,288,520 to 5,289,239 _23580
Group Condition AO356_23560 AO356_23565 AO356_23570 AO356_23575 AO356_23580
carbon source L-Lysine (C) -0.4 -0.3 -0.1 +0.1 -0.3
stress nitrite 10 mM -0.5 -0.1 -0.4 +0.2 -0.1
carbon source L-Arginine (C) -0.2 -0.3 -0.3 -0.0 +0.1
carbon source L-Leucine (C) -0.1 -0.1 -0.4 -0.3 +0.1
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.2 -0.3 -0.2 -0.1 +0.3
stress methylglyoxal 0.016 vol% -0.2 -0.5 -0.0 +0.2 +0.0
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.2 -0.4 -0.0 -0.2 +0.3
motility outer cut, LB soft agar motility assay -0.2 +0.1 +0.2 +0.6 -1.1
carbon source pyruvate (C) -0.1 +0.3 -0.2 +0.1 -0.3
carbon source D,L-Lactate (C) -0.2 -0.1 -0.2 +0.1 +0.3
stress Cobalt chloride 0.08 mM -0.1 -0.3 -0.2 +0.1 +0.3
nitrogen source D-Serine (N) -0.1 -0.6 +0.2 +0.1 +0.2
stress copper (II) chloride 2.5 mM -0.1 -0.2 -0.5 +0.1 +0.3
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.1 -0.3 -0.0 -0.2 +0.4
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.1 -0.3 -0.0 -0.1 +0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.3 -0.1 +0.1 -0.4 -0.1
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.2 -0.2 -0.1 -0.1 +0.4
carbon source Carbon source D-Mannitol 10 mM +0.2 -0.4 -0.1 -0.1 +0.2
carbon source Carbon source D-Mannitol 2.5 mM +0.1 -0.5 +0.1 -0.1 +0.2
stress Choline chloride 300 mM +0.1 -0.4 +0.1 +0.1 +0.2
resistance 20 mM putrescine -0.2 -0.2 +0.1 -0.2 +0.6
pH Minimal media pH7 -0.1 +0.2 -0.2 +0.2 +0.2
stress KB-half, Pseudo5 supernatant +0.2 +0.3 +0.3 -0.3 -0.1
carbon source a-Ketoglutaric (C) -0.1 +0.3 -0.2 +0.2 +0.1
stress Sisomicin 0.001 mg/ml -0.1 +0.1 +0.4 -0.3 +0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.1 -0.4 +0.3 +0.2 +0.4
carbon source L-Histidine (C) +0.1 +0.1 +0.1 -0.2 +0.5
carbon source L-Lysine (C) -0.2 +0.3 +0.0 +0.1 +0.4
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.2 -0.2 +0.2 +0.2 +0.4
anaerobic Nitrate reduction with yeast extract +0.2 +0.4 +0.3 +0.1 +0.1
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