Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2C3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 198 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO356_23560 and AO356_23565 are separated by 102 nucleotides
AO356_23565 and AO356_23570 overlap by 20 nucleotides
AO356_23570 and AO356_23575 are separated by 2 nucleotides
AO356_23575 and AO356_23580 are separated by 444 nucleotides
AO356_23560: AO356_23560 - hypothetical protein, at 5,281,149 to 5,283,518
_23560
AO356_23565: AO356_23565 - peptidase, at 5,283,621 to 5,285,405
_23565
AO356_23570: AO356_23570 - hemolysin secretion protein D, at 5,285,386 to 5,286,699
_23570
AO356_23575: AO356_23575 - channel protein TolC, at 5,286,702 to 5,288,075
_23575
AO356_23580: AO356_23580 - LuxR family transcriptional regulator, at 5,288,520 to 5,289,239
_23580
Group
Condition
AO356
_23560
AO356
_23565
AO356
_23570
AO356
_23575
AO356
_23580
carbon source
L-Lysine (C)
-0.4
-0.3
-0.1
+0.1
-0.3
stress
nitrite 10 mM
-0.5
-0.1
-0.4
+0.2
-0.1
carbon source
L-Arginine (C)
-0.2
-0.3
-0.3
-0.0
+0.1
carbon source
L-Leucine (C)
-0.1
-0.1
-0.4
-0.3
+0.1
resistance
10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine
-0.2
-0.3
-0.2
-0.1
+0.3
stress
methylglyoxal 0.016 vol%
-0.2
-0.5
-0.0
+0.2
+0.0
resistance
50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine
-0.2
-0.4
-0.0
-0.2
+0.3
motility
outer cut, LB soft agar motility assay
-0.2
+0.1
+0.2
+0.6
-1.1
carbon source
pyruvate (C)
-0.1
+0.3
-0.2
+0.1
-0.3
carbon source
D,L-Lactate (C)
-0.2
-0.1
-0.2
+0.1
+0.3
stress
Cobalt chloride 0.08 mM
-0.1
-0.3
-0.2
+0.1
+0.3
nitrogen source
D-Serine (N)
-0.1
-0.6
+0.2
+0.1
+0.2
stress
copper (II) chloride 2.5 mM
-0.1
-0.2
-0.5
+0.1
+0.3
resistance
10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine
-0.1
-0.3
-0.0
-0.2
+0.4
resistance
10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine
-0.1
-0.3
-0.0
-0.1
+0.3
stress
KB-half, Pseudo11 supernatant, 100 uM FeCl3
+0.3
-0.1
+0.1
-0.4
-0.1
resistance
50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine
-0.2
-0.2
-0.1
-0.1
+0.4
carbon source
Carbon source D-Mannitol 10 mM
+0.2
-0.4
-0.1
-0.1
+0.2
carbon source
Carbon source D-Mannitol 2.5 mM
+0.1
-0.5
+0.1
-0.1
+0.2
stress
Choline chloride 300 mM
+0.1
-0.4
+0.1
+0.1
+0.2
resistance
20 mM putrescine
-0.2
-0.2
+0.1
-0.2
+0.6
pH
Minimal media pH7
-0.1
+0.2
-0.2
+0.2
+0.2
stress
KB-half, Pseudo5 supernatant
+0.2
+0.3
+0.3
-0.3
-0.1
carbon source
a-Ketoglutaric (C)
-0.1
+0.3
-0.2
+0.2
+0.1
stress
Sisomicin 0.001 mg/ml
-0.1
+0.1
+0.4
-0.3
+0.4
phage
P5ss-5 phage 10-1 dilution SM calcl2
+0.1
-0.4
+0.3
+0.2
+0.4
carbon source
L-Histidine (C)
+0.1
+0.1
+0.1
-0.2
+0.5
carbon source
L-Lysine (C)
-0.2
+0.3
+0.0
+0.1
+0.4
stress
1-ethyl-3-methylimidazolium chloride 200 mM
+0.2
-0.2
+0.2
+0.2
+0.4
anaerobic
Nitrate reduction with yeast extract
+0.2
+0.4
+0.3
+0.1
+0.1
remove
AO356_23560
plot
remove
AO356_23565
plot
remove
AO356_23570
remove
AO356_23575
plot
remove
AO356_23580
plot