Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22920 and AO356_22925 are separated by 570 nucleotidesAO356_22925 and AO356_22930 are separated by 5 nucleotidesAO356_22930 and AO356_22935 are separated by 251 nucleotidesAO356_22935 and AO356_22940 are separated by 4 nucleotides AO356_22920: AO356_22920 - nicotinamidase, at 5,117,972 to 5,118,625 _22920 AO356_22925: AO356_22925 - histidine kinase, at 5,119,196 to 5,121,274 _22925 AO356_22930: AO356_22930 - DNA alkylation repair protein, at 5,121,280 to 5,122,383 _22930 AO356_22935: AO356_22935 - hypothetical protein, at 5,122,635 to 5,122,943 _22935 AO356_22940: AO356_22940 - hypothetical protein, at 5,122,948 to 5,123,271 _22940
Group Condition AO356_22920 AO356_22925 AO356_22930 AO356_22935 AO356_22940
stress nitrate 200 mM -1.1 -0.1 -0.3 -0.5 N.D.
lb LB -0.1 -0.1 -0.4 -0.8 N.D.
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.5 +0.0 -0.1 -0.6 N.D.
carbon source L-Alanine (C) -0.9 -0.1 +0.1 -0.1 N.D.
nitrogen source Carnitine Hydrochloride (N) -0.5 +0.0 +0.1 -0.7 N.D.
carbon source L-Glutamic (C) -0.8 +0.2 -0.2 -0.1 N.D.
stress Cisplatin 0.0032 mg/ml +0.2 +0.1 -0.1 -1.0 N.D.
carbon source Glycerol (C) -0.8 +0.1 +0.2 -0.2 N.D.
carbon source L-Glutamic (C) +0.0 +0.3 -0.2 -0.7 N.D.
stress acetate 40 mM +0.4 -0.1 +0.1 -1.0 N.D.
motility outer cut, LB soft agar motility assay +0.4 +0.4 -0.4 -0.8 N.D.
nitrogen source nitrite (N) -0.7 +0.2 +0.2 -0.2 N.D.
nitrogen source L-tyrosine (N) +0.2 -0.1 +0.2 -0.8 N.D.
stress Paraquat dichloride 0.0625 mg/ml +0.2 +0.1 -0.2 -0.6 N.D.
stress Lomefloxacin 0.0005 mM +0.6 -0.2 -0.5 -0.2 N.D.
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.4 +0.3 -0.3 -0.8 N.D.
carbon source D-Xylose (C) +0.5 +0.0 -0.3 -0.5 N.D.
stress Sisomicin 0.001 mg/ml +0.5 -0.3 -0.4 -0.1 N.D.
stress Nickel (II) chloride 0.625 mM +0.4 +0.3 +0.0 -0.7 N.D.
stress methylglyoxal 0.016 vol% +0.4 +0.1 +0.2 -0.8 N.D.
stress Rifampicin 0.0024 mg/ml -0.4 +0.1 -0.1 +0.6 N.D.
carbon source a-Ketoglutaric (C) +0.5 +0.3 +0.2 -0.6 N.D.
carbon source Carbon source Sucrose 10 mM +0.8 +0.1 +0.3 -0.1 N.D.
carbon source Carbon source D,L-Lactate 10 mM -0.1 +0.4 +0.3 +0.4 N.D.
carbon source Carbon source D-Mannitol 10 mM -0.1 +0.0 +0.3 +0.9 N.D.
carbon source Carbon source D-Mannitol 2.5 mM -0.0 +0.1 +0.2 +1.0 N.D.
carbon source Carbon source D,L-Lactate 10 mM +0.1 +0.2 +0.2 +0.8 N.D.
stress copper (II) chloride 2.5 mM +0.7 +0.3 -0.1 +0.6 N.D.
stress KB-half, Pseudo5 supernatant +0.4 +0.7 +0.3 +0.3 N.D.
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.0 +0.6 +0.0 +1.3 N.D.
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