Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22830 and AO356_22835 are separated by 231 nucleotidesAO356_22835 and AO356_22840 are separated by 246 nucleotidesAO356_22840 and AO356_22845 are separated by 250 nucleotidesAO356_22845 and AO356_22850 are separated by 176 nucleotides AO356_22830: AO356_22830 - diguanylate phosphodiesterase, at 5,093,773 to 5,095,317 _22830 AO356_22835: AO356_22835 - LysR family transcriptional regulator, at 5,095,549 to 5,096,412 _22835 AO356_22840: AO356_22840 - multidrug transporter, at 5,096,659 to 5,097,603 _22840 AO356_22845: AO356_22845 - 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data), at 5,097,854 to 5,098,930 _22845 AO356_22850: AO356_22850 - chemotaxis protein, at 5,099,107 to 5,099,991 _22850
Group Condition AO356_22830 AO356_22835 AO356_22840 AO356_22845 AO356_22850
nitrogen source L-tyrosine (N) -0.1 N.D. -0.1 -4.4 -0.1
nitrogen source L-Phenylalanine (N) -0.0 N.D. -0.0 -2.4 -0.1
motility outer cut, LB soft agar motility assay -0.4 N.D. -0.2 -0.5 -0.2
stress methylglyoxal 0.016 vol% -0.5 N.D. -0.3 -0.4 +0.0
carbon source L-Histidine (C) -0.3 N.D. -0.1 -0.3 -0.4
survival 4C survival; 672 hrs -0.2 N.D. -0.2 -0.5 -0.2
stress Thallium(I) acetate 0.008 mg/ml -0.1 N.D. +0.1 -0.1 -0.9
survival 4C survival; 1152 hrs -0.2 N.D. +0.1 -0.7 -0.2
stress Thallium(I) acetate 0.008 mg/ml -0.1 N.D. +0.1 -0.2 -0.6
carbon source Inosine (C) -0.2 N.D. -0.2 -0.3 -0.1
anaerobic Nitrate reduction with yeast extract -0.3 N.D. -0.3 +0.3 -0.5
carbon source Fumarate (C) -0.2 N.D. -0.0 -0.5 -0.1
stress perchlorate 75 mM +0.1 N.D. -0.1 -0.5 -0.2
carbon source acetate (C) +0.0 N.D. +0.1 -0.8 +0.0
carbon source D-Sorbitol (C) +0.1 N.D. -0.2 -0.3 -0.2
carbon source acetate (C) +0.1 N.D. +0.1 -0.7 -0.0
carbon source Fumarate (C) -0.2 N.D. +0.1 -0.2 -0.2
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.1 N.D. -0.0 -0.7 -0.0
stress Nickel (II) chloride 0.625 mM -0.2 N.D. +0.1 -0.4 -0.1
stress Chlorite 0.08 mM +0.1 N.D. +0.1 -0.5 -0.2
carbon source D-Glucosamine Hydrochloride (C) -0.2 N.D. +0.1 -0.3 -0.1
stress Chlorite 0.04 mM +0.1 N.D. +0.1 -0.6 -0.1
carbon source D-Lactate (C) -0.2 N.D. +0.1 -0.3 +0.1
carbon source D-Lactate (C) -0.1 N.D. +0.1 -0.4 +0.2
stress Lomefloxacin 0.0005 mM -0.4 N.D. +0.1 +0.2 +0.0
stress Benzalkonium Chloride 0.016 mg/ml +0.2 N.D. -0.0 +0.4 -0.2
carbon source Carbon source Sucrose 10 mM +0.1 N.D. +0.3 +0.1 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.4 N.D. +0.1 +0.2 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.3 N.D. +0.1 +0.5 +0.1
stress KB-half, Pseudo5 supernatant +0.3 N.D. +0.2 +0.4 +0.4
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