Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_22650 and AO356_22655 overlap by 4 nucleotidesAO356_22655 and AO356_22660 overlap by 4 nucleotidesAO356_22660 and AO356_22665 are separated by 39 nucleotidesAO356_22665 and AO356_22670 are separated by 33 nucleotides AO356_22650: AO356_22650 - chemotaxis protein CheD, at 5,061,794 to 5,062,291 _22650 AO356_22655: AO356_22655 - SAM-dependent methyltransferase, at 5,062,288 to 5,063,124 _22655 AO356_22660: AO356_22660 - chemotaxis protein CheW, at 5,063,121 to 5,063,657 _22660 AO356_22665: AO356_22665 - chemotaxis protein, at 5,063,697 to 5,065,355 _22665 AO356_22670: AO356_22670 - chemotaxis protein CheA, at 5,065,389 to 5,067,491 _22670
Group Condition AO356_22650 AO356_22655 AO356_22660 AO356_22665 AO356_22670
stress 1-ethyl-3-methylimidazolium lysine 10 mM -1.8 +0.0 +0.1 -0.6 +0.1
temperature LB 10C -1.4 +0.0 -0.2 -0.5 +0.1
motility outer cut, LB soft agar motility assay -1.3 -0.2 -0.2 +0.2 -0.3
carbon source Carbon source D-Mannitol 2.5 mM -0.1 -0.2 -0.4 -0.9 -0.2
carbon source L-Lysine (C) -1.4 -0.2 +0.2 -0.2 -0.1
temperature LB 10C -0.3 -0.0 -0.6 -0.8 +0.0
survival 4C survival; 360 hrs -1.4 +0.1 -0.1 -0.2 +0.1
pH Minimal media pH8 -0.9 -0.0 -0.2 -0.5 +0.1
stress methylglyoxal 0.016 vol% -1.2 -0.3 +0.2 -0.3 +0.1
carbon source Carbon source D-Glucose 10 mM -1.0 -0.3 -0.4 +0.3 -0.1
lb LB -1.2 +0.1 -0.1 -0.2 +0.0
stress sodium fluoride 6.25 mM -0.6 +0.2 -0.6 -0.4 +0.1
stress Chlorite 0.08 mM -1.2 +0.1 +0.4 -0.7 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.1 +0.3 -0.3 -1.1 +0.0
anaerobic Nitrate reduction with yeast extract -1.4 -0.1 -0.1 +0.8 -0.3
stress Thallium(I) acetate 0.008 mg/ml -0.7 -0.2 +0.2 -0.5 +0.1
carbon source Carbon source Sucrose 5 mM +0.4 -0.1 -0.3 -0.9 -0.1
stress Cobalt chloride 0.08 mM -0.6 +0.3 +0.1 -0.8 +0.1
carbon source Carbon source Sucrose 5 mM -0.9 +0.1 +0.2 -0.2 +0.0
carbon source D-Gluconic Acid (C) -0.3 +0.2 +0.2 -0.9 +0.1
carbon source L-Arabinose (C) -0.8 -0.0 +0.3 -0.4 +0.1
stress Spectinomycin 0.025 mg/ml -0.8 +0.0 +0.5 -0.3 -0.1
carbon source D-Glucose (C) -0.3 +0.1 +0.4 -0.8 +0.1
stress Benzalkonium Chloride 0.016 mg/ml -0.8 +0.2 +0.6 -0.3 +0.0
stress Aluminum chloride 5 mM -0.9 +0.0 +0.5 -0.1 +0.2
motility outer cut, LB soft agar motility assay +0.9 -0.1 -0.3 -0.3 -0.1
carbon source L-Histidine (C) +0.8 +0.0 -0.4 -0.3 +0.1
stress Rifampicin 0.0016 mg/ml +0.5 +0.1 +0.2 -0.6 +0.1
stress Sisomicin 0.001 mg/ml +1.0 -0.3 -0.3 +0.3 +0.1
nitrogen source Urea (N) +1.0 +0.0 +0.4 -0.4 +0.0
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